Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02689 ATGAGTCCCAAAGGAGATGATGTTGTTGTGTCTAACATGGAGCTTGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGCCAGTTATGCTAACAATTCACAAGCACAGGCTAGACACGCTCGTTCCATGCTTCATCTTCTTAAAGAAACCATAGACAGGGTTCAACTGGGTACCCCTGAAATCCCATTTGTGGTGGTGGACTTGGGTTGTTCGTGTGGAAGCAACACTATCTACATCGTTGATGTGATTATCAAGCACATTATCAAGCGTTACGAGGCCTCGGGAAGCAATCCACCGGAATTTTCTGCCTTCTTCTCCGACCTTCCGAGCAATGACTTCAACACCCTCTTCCAGCTGCTTCCTCCACTAGCAAACTATGGGGTCAGCATGGAAGAATGTCTTGCTGCCAACAATCACCGCCCCTACTTCGCGGCTGGTGTTCCCGGCTCTTTCTATCGGAGGCTTTTTCCGGCGAGGTCTATTAATCTTTTCCACTCAGCCTTCTCTTTGCACTGGTTATCTCAGGTGCCAGAAAAAGTGCTGGACAAGAGGTCAAATGCATACAACGAAGGCAGGGTTTTCATCCACGGTGCAAGTGAGAACACAGCAAATGCTTACAAGAAGCAGTTCCAAACAGACTTAGCAAGCTTCCTGAGAGCAAGATCACAAGAGATGAAAAGGGGAGGGTCCATGTTCTTGGTTTGCTTGGGCAGGACCTCTGTGGACCCCACAGACCATGGTGGGGCTGGCATACTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGACTGATTAGTAGTGAGATGCGTGACAACTTCAACATCCCTGTGTATGCACCAAGTATCCAAGACTTCAGGGAAGTGGTTGAAGCTGATGGCTCATTCACCATAGACAGGCTTGAGGTATTCGAAGGAGGAAGCCCTCTTGAGGTTAATCAACCGGATGATGCAACTGAAGTTGGAAAGGCACTAGCCAACAGTTGCAGAAGTGTCTCTGGAGTCCTAGTTGATGCCCACATTGGTGACAAGCTCAGTGAGGAGCTTTTTCTCAGAGTTGAGAAAAGAGGCACAAGCAATGCCAAAGAGCTGTTAGAGCAACTGCAGTTCTATCACATTGttgcttctctttcttttccttg 1157 0.4745 MSPKGDDVVVSNMELERLLSMKGGKGEASYANNSQAQARHARSMLHLLKETIDRVQLGTPEIPFVVVDLGCSCGSNTIYIVDVIIKHIIKRYEASGSNPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRPYFAAGVPGSFYRRLFPARSINLFHSAFSLHWLSQVPEKVLDKRSNAYNEGRVFIHGASENTANAYKKQFQTDLASFLRARSQEMKRGGSMFLVCLGRTSVDPTDHGGAGILFGTHFQDAWDDLVQEGLISSEMRDNFNIPVYAPSIQDFREVVEADGSFTIDRLEVFEGGSPLEVNQPDDATEVGKALANSCRSVSGVLVDAHIGDKLSEELFLRVEKRGTSNAKELLEQLQFYHIVASLSFP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02689 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 383 IPR029063 -
Bva12g02689 385 Pfam SAM dependent carboxyl methyltransferase 62 382 IPR005299 GO:0008168
Bva12g02689 385 Gene3D - 19 365 IPR042086 -
Bva12g02689 385 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 383 - -
Bva12g02689 385 Gene3D Vaccinia Virus protein VP39 33 312 IPR029063 -
Bva12g02689 385 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 383 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02689 Bva-Chr12 19707487 19711017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02689 K18848 - jre:108983414 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01079 12 10731434 10735771 Bva12g02689 12 19707487 19711017 BWGD
Bva12g02689 12 19707487 19711017 Bva12g02689 12 19707487 19711017 ECH