Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02685 atggccACGCTTCACCTTTGTCACACAAACGCAAAAGACTTGGTCTCGTCATCATCAATTCGCACTCCGCTTCAGTACAATGCActctcttcctcctcctctgTGCTCAGAACCTGCCTCTCTTTCAACCCCAGAAGAAGCCCCTCTGAACGCCAGATTTGTCGTTATGGGCCCGTGAGCTGCTCCTTCGCACCTGTAGATAACGCCAAAATCAAGGTCGTTGGAGTCGGTGGTGGTGGCAATAATGCTGTCAATCGCATGATTGCAAGTGGTTTGCAGGGGGTAGATTTTTACGCAATAAACACAGATGCCCAAGCATTAGTGCATTCATCGGCAGAGAACCCACTTCAAATTGGAGAACTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTAGGGGAACAAGCTGCAGAGGAGTCGAAAGAAGCTATTGCTAATGCTCTTAAAGGCTCAGATCTTGTTTTTATAACAGCTGGTATGGGTGGTGGCACAGGGTCTGGTGCTGCCCCAGTCGTGGCCCAAATATCCAAAGAGTCTGGTTACTTGACTGTTGGCGTGGTTACCTATCCTTTCAGTTTTGAAGGACGCAAAAGATCCTTGCAGGCGCTGGAAGCCATTGAAAAGTTGCAGAAAAATGTTGATACACTTATAATGATTCCGAATGACCGTCTACTCGACATTGCTGATGAGCAGACACCTCTTCAGGATGCTTTCCTTCTTGCAGATGATGTTCTTCGTCAAGGAGTACAGGGAATATCAGACATTATAACAATACCTGGGCTGGTCAATGTGGATTTCGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCATCTAGTAAAAACCGTGCAGAAGAAGCCGCAGAACAAGCAACTTTGGCTCCTCTAATTGGATCTTCTATTGAGTCAGCTACTGGGGtagtatataatattactGGAGGGAAGGACATAACCCTGCAGGAAGTGAATAGAGTGTCTCAGGTAGTTACAAGCTTGGCTGATCCTTCagcaaatattatatttgggGCCGTCGTTGACGACCGCTACACTGGGGAGATTCATGTGACTATCATTGCGACTGGTTTCTCACAATCATTTCAGAAGACACTACTAACAGATCCAAGAGTTGCAAAACTGGTTGACAAAGTTGCTGGGGCCCAAGAAAGCAAGGCAATGCCGTCTCCCTTCAACTCCTCAAACAACGCTTCAACAATTCCATCTAGAGGATCCCTCCGAAGGCTCTTCTTTta 1280 0.4461 MATLHLCHTNAKDLVSSSSIRTPLQYNALSSSSSVLRTCLSFNPRRSPSERQICRYGPVSCSFAPVDNAKIKVVGVGGGGNNAVNRMIASGLQGVDFYAINTDAQALVHSSAENPLQIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKESGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIMIPNDRLLDIADEQTPLQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIESATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKTLLTDPRVAKLVDKVAGAQESKAMPSPFNSSNNASTIPSRGSLRRLFF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02685 426 Pfam FtsZ family, C-terminal domain 279 372 IPR024757 -
Bva12g02685 426 ProSitePatterns FtsZ protein signature 2. 154 175 IPR020805 GO:0005525
Bva12g02685 426 Gene3D Tubulin/FtsZ, GTPase domain 64 277 IPR036525 -
Bva12g02685 426 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 6 426 - -
Bva12g02685 426 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 6 426 IPR045061 GO:0003924|GO:0005525
Bva12g02685 426 Gene3D - 278 383 IPR037103 -
Bva12g02685 426 CDD FtsZ_type1 86 371 IPR000158 GO:0003924|GO:0005525
Bva12g02685 426 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 163 169 IPR017975 GO:0005525|GO:0005874|GO:0007017
Bva12g02685 426 SUPERFAMILY Tubulin nucleotide-binding domain-like 69 265 IPR036525 -
Bva12g02685 426 SMART Tubulin_4 70 262 IPR003008 GO:0005525
Bva12g02685 426 Hamap Cell division protein FtsZ [ftsZ]. 66 395 IPR000158 GO:0003924|GO:0005525
Bva12g02685 426 PRINTS Cell division protein FtsZ signature 183 204 IPR003008 GO:0005525
Bva12g02685 426 PRINTS Cell division protein FtsZ signature 246 268 IPR003008 GO:0005525
Bva12g02685 426 PRINTS Cell division protein FtsZ signature 155 175 IPR003008 GO:0005525
Bva12g02685 426 PRINTS Cell division protein FtsZ signature 269 290 IPR003008 GO:0005525
Bva12g02685 426 SUPERFAMILY Tubulin C-terminal domain-like 264 379 IPR008280 -
Bva12g02685 426 ProSitePatterns FtsZ protein signature 1. 101 135 IPR020805 GO:0005525
Bva12g02685 426 TIGRFAM ftsZ: cell division protein FtsZ 65 379 IPR000158 GO:0003924|GO:0005525
Bva12g02685 426 Pfam Tubulin/FtsZ family, GTPase domain 70 230 IPR003008 GO:0005525
Bva12g02685 426 SMART Tubulin_C_4 264 381 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02685 Bva-Chr12 19685422 19688815 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02685 K03531 - vvi:100243513 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02685 12 19685422 19688815 Bva12g02685 12 19685422 19688815 ECH