Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02676 ATGAGTAGAAGCGTGGACTGCTTGGAAAGGACACTAAGgaaaatttacttttctggGAAAGAGTTGCAGGCTTCACCAGTGGAAATGTGGGAATTGAGTGGTGTCTCTGGTACACTTGGGTTATTGGTTCTTTACACGTTGATAGCTTTGGTCTCTGCTGATGGGAATGACTGGAAAACATTGAAAGGATCTCCACCACTGGTCATAGCACGTGGTGGGTTTTCAGGGATTTTTCCAGATTCAAGCTCGGCTGCCTATACTTTGGCAGTGAACAAAAGTGTGTCAAACGTGACCTTATGGTGTGACGTGCAGTTGACAAAGAATGGAACTGGGATTTGTTTTCCAGAACTGAAGCTGGACAATGCCACTGACATTTCCATCATTTACCCAGGCAAATCCAAGAACTACCCAATTAATGGGATTCCAACCCGCGGATACTTTTCCATTGATTACAACTTGGATGAACTAAAAAATGTCACCCTTGTTCAGGGAGTCTACTCAAGAACTAACAAATTTGACGGCAACAAGTTTCCCATTCTCACTGTTGATGATGTAATAAAGCTAGTAAAGCCACATGGCCTGTGGTTAAACATTCAGAATGCTGCATTCTTCATGCAGCAGAATCTGAACATTACAACCTTTCTGCTTTCTGTGTCTGGAACTGGAGGAGTTTCTTACATCTCATCGCCTGATTCCAGTTTCTTACGAAGCATAAAGTCACACTTCAGTTCCCAAAAGCCCGGCATCGTCTTCAGGTTTCTTGGGCAGGATGAGTCTGAACCTAGAACTAATAAGTCTTATGGTTCATTCTTGAAAGATCTCACAGCTATCAGATCATTTGCTTCTGGAATTCTGGTTCCCAAAAGTTACATATGGCCTGTAGACTCTGACCTTTATCTACAACCACCTACCTCTCTTGTCTCAGATGCTCACAAAGCAGGGCTAAAAGTTTTTGTATCAGACATTGTTAATGATCTTGTCTTCAGTTACAACTACAGTTACGATCCTCTAGCTGAATGCCTATCTTTCATTGACAATAATGTTAGCTTTTCTGTTGATGGCATACTGTCCGATTTCCCGGTAACTCCATCGGCAGCCATTGATTGCTTTTCTCACCTGGAACATGCCCAAAAGCAAgGGAAGACACTGGTTATCTCAAAATATGGAGCAAGTGGAGACTATCCTGCTTGTACTGACTTAGCATATAACAAAGCTATATCAGATGGTGCAGATGTAATTGACTGTCCTGTTCAGATGTCAAAGGATGGAATACCATTTTGCTTAAGCTCCATAGATCTTGTAGAAAGCACAACAGTTTTACAATCAAACTTCAGCAAGCTTGAAACAACTATTCCAGAGATCAAGCCCAACAGTGGCATATTTACATTCAGTCTGACATGGAATGAGATTAAAACCTTGACTCCCTCAATATTGAATCCCTATGATAAGTACAGGTTGTACCGGAATCCAAAGTTCAAAAATGCAGGGAAACTTCTAACCTTGTCTAAGTTTTTGTCACTGAAAAGAGGTCAGACATCTGGTATTTTGATCAGCATAGAGAATGCAGCCTATCTTGCAGTGAAGCAGAACCTGAGTGTGACAAATGCAGTCGTTGATGCTTTGAGAAAATCTGGTTATGATAAGCAGTCAGTGTCCCAAGGAGTTATGATTCAGTCCACTCACAGCTCTCTGCTGAAGGAATTCAAGGCAAAAACCAAATATGAGATAGTATACAAGGTTGATGAGAGTATTTCTGATGCTGATGATTCAGCTGTTAAAGACATCAAGATGTTTGCTCATTCTGTGGTTGTGGGAAAGTCATCTGTGTATCCTGTAACTTCAGCTTTTCTGACCAACGCCACAAATACTGTGTCAAAGCTAAAATCAAATAACCTCAAGGTTTATGTGGAAACTTTCAGCAATGAGTTTGTGTCCCAAGCATGGGACTACTACTCGGATGCCTTTGTTGAGATCAATTCAGTTGTTTCAGGAGAAAATATTGATGGCATTATCACAGACTTCCCCAAAACAGCTGACAGATACAGAAAGAACCGGTGTTTAAAGCAGAACAAAAAACCAGCTTATATGATGCCTGTTGAACCTGGCATGCTTTTGCAACAAGTTACCCGGCAGTTCTATCCAGAACCTGCCCCTCCACTGCCAGTCTTGAAAGATATTAATGTGACAGAGCCACCTTTGCCTTCTGTCCCTAGCATTGCCCCTTCTCCAGCACCCACCAGACTCAGAATCTG 2252 0.4156 MSRSVDCLERTLRKIYFSGKELQASPVEMWELSGVSGTLGLLVLYTLIALVSADGNDWKTLKGSPPLVIARGGFSGIFPDSSSAAYTLAVNKSVSNVTLWCDVQLTKNGTGICFPELKLDNATDISIIYPGKSKNYPINGIPTRGYFSIDYNLDELKNVTLVQGVYSRTNKFDGNKFPILTVDDVIKLVKPHGLWLNIQNAAFFMQQNLNITTFLLSVSGTGGVSYISSPDSSFLRSIKSHFSSQKPGIVFRFLGQDESEPRTNKSYGSFLKDLTAIRSFASGILVPKSYIWPVDSDLYLQPPTSLVSDAHKAGLKVFVSDIVNDLVFSYNYSYDPLAECLSFIDNNVSFSVDGILSDFPVTPSAAIDCFSHLEHAQKQGKTLVISKYGASGDYPACTDLAYNKAISDGADVIDCPVQMSKDGIPFCLSSIDLVESTTVLQSNFSKLETTIPEIKPNSGIFTFSLTWNEIKTLTPSILNPYDKYRLYRNPKFKNAGKLLTLSKFLSLKRGQTSGILISIENAAYLAVKQNLSVTNAVVDALRKSGYDKQSVSQGVMIQSTHSSLLKEFKAKTKYEIVYKVDESISDADDSAVKDIKMFAHSVVVGKSSVYPVTSAFLTNATNTVSKLKSNNLKVYVETFSNEFVSQAWDYYSDAFVEINSVVSGENIDGIITDFPKTADRYRKNRCLKQNKKPAYMMPVEPGMLLQQVTRQFYPEPAPPLPVLKDINVTEPPLPSVPSIAPSPAPTRLRI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02676 750 ProSiteProfiles GP-PDE domain profile. 382 682 IPR030395 GO:0006629|GO:0008081
Bva12g02676 750 CDD GDPD_SHV3_repeat_1 66 366 - -
Bva12g02676 750 Pfam Glycerophosphoryl diester phosphodiesterase family 73 360 IPR030395 GO:0006629|GO:0008081
Bva12g02676 750 Pfam Glycerophosphoryl diester phosphodiesterase family 389 677 IPR030395 GO:0006629|GO:0008081
Bva12g02676 750 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 38 743 - -
Bva12g02676 750 SUPERFAMILY PLC-like phosphodiesterases 65 365 IPR017946 GO:0006629|GO:0008081
Bva12g02676 750 ProSiteProfiles GP-PDE domain profile. 66 367 IPR030395 GO:0006629|GO:0008081
Bva12g02676 750 CDD GDPD_SHV3_repeat_2 383 681 - -
Bva12g02676 750 Gene3D Phosphatidylinositol (PI) phosphodiesterase 381 681 IPR017946 GO:0006629|GO:0008081
Bva12g02676 750 Gene3D Phosphatidylinositol (PI) phosphodiesterase 65 366 IPR017946 GO:0006629|GO:0008081
Bva12g02676 750 SUPERFAMILY PLC-like phosphodiesterases 381 682 IPR017946 GO:0006629|GO:0008081
Bva12g02676 750 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 38 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02676 Bva-Chr12 19643448 19647692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02676 40 745 Receptor kinase-like Gene Family AT4G26690 54.698 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02676 - - gmx:100813869 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02676 12 19643448 19647692 Bva12g02676 12 19643448 19647692 ECH