Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02666 ATGAGGCAAAGCGCAGAAACTGCCGAGACTCGTTTCTTGGGCAGCCTATCATCCTCATCGATCAGAAACCTTCTTTCCAAATCACTCTCTTCCAAGCAAAAGTCCAGCACAAacccaaaaattttcaaatcaaatgcCGAGAACACTCCACCCGTAGATCCGAACATCGAGATCAACGATGGCCAATTGTTGCCTACCAAGCAATTACAGTCCGAAACCCCAACTTCCGAGAATGAAGTCGCTGAATCGGTGGCTCCTATTGAATCACCGACTCCTCAGGAACCATCAGTGAAGGTTGTAGTACGAATTAGACCTGTTAATAGCCATGGGAAGGAGGGAGATCGGACCGTTAAGAAGGTTTCTTCTGATACATTATGTGTCGGTGAAAGAAAGTTCACATTTGATTCGGTTTTTGATTCAAACTCTGATCAGGAAGATATTTTTCACTCAGTTGGTGTCCCGTTGGTTAAAAATGCTTTAGCTGGTTACAACACTTCACTTCTATCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCTCCAAGTGCCATGGTTGAGGAGTCTTCGCGTAGTGGTCACCAGGGAATTGTTCCTCGGATCTTCCAAATGTTATTTTCTGAGCTTGAGAAAGAGGAGCAGACCTCTGAAGGGAAACAGTTTAATTATCAATGTCGTTGTTCTTTCCTTGAGATATATAATGAACAAATAGGGGATTTGCTTGATCCAACCCAGCGGAACCTTGAGATGAAGGAGGATTCCAAAAGTCCATTGTATGTTGAGAATCTGACAGAAGAATATGTCACTAGCTATGAGGATGTGATACAAATCCTAATTAAGGGCCTTTCAAGTAGGAAAGTTGGAGCGACAAGCTTAAATTCTAAGAGTTCTAGATCACACATCATTTTCACGTTAGTCTTTGAGTCCTGGTGCAAGGAGACCATGTCAAAGGGTTTCAGTAGTTCAAAAACAAGCAGGATTAGCCTTATCGATCTAGCTGGAATAGATAGAAATAAAGTTGATGATGGAGGCAGACAATGTTTAAAGGAAAGCAAAAATGTAAAGAAGTCTTTATCACAGCTTGGGCGCTTAGTGGATGCTCTGACTAAAGAAACTCAATCAGGAAAAGCAGAAGATATTCCAAACAGGAATTCCTGTTTAACGCGTTTATTACGAGAATCACTTGGTGGAAATGCCAAACTCTCTGTAATCTGTTCCATCTCCCCTGATAACAAGAGTGATGGTGAAACACTGCGGACACTCAGATTTGGACAACGAGTAAGATCCGTTAGAAATGAGCCAgtgataaatgaaataaaggagGACGATGTAAATGGTTTGAGTGATCAAATCCGTAAGCTGAAGGAAGAACTTATACGAGCAAAAACAGATGTTTATAGCTcagttagaaataaaaatggataCTTCCAAGGACCTAACGTGCGGGAAAGCTTGAATCAGTTAAGAGTCAGTTTAAACCGCTCTTTACTCCTACCTCACTTAGATAATGATACTGATGAAGAGATGAATGTCGATGAGGATgatgtaagggaattgagcCGGCAAATTGATGAACTTTATAGCTCGTGTGAAGTTATTCCAGAAGACATATCTATCTATGCGGATTGTGTGCCGTTTTCTTCAGTTGAGGACAGCAGTGACGTAGACATGACCAGTGGTGATGGAATTGAGAAAATGGAAGTATCTGCTGAAAGAATATCGAGTACGCCCTGTCATGAGGACAATGTGTCATCAGAAGATAGCCAAGTATTCTTAGATAACACGTGTGCAATTAAATCTACATTCAAAAGTAGCATTTCAGTCAGCCCTTCCTGTCAATCTCCCATCCTTGATGAACCACAGTTGTCTGAGTCTCCAAAAATCAGAAATACCCAAAGGAAAAGCATGATAATTTCATCAAGTTGCCTCGGAAGTAGGAACAATGTGTCAGACAGTTCCAATATCGGTAAAGATGTGTTGGGACAATCATTTAAACCTAGTGATCATATCCGATCCTCTTTAAGGTCAAGTAAGGTCTTACCAGGCGCAACCGAATCCTTGGCAGCAAGCCTTCAGAGAGGCTTGCAGATAATTGACTGTCACCAGCGGAACTCAGCATTGAACAAATCTTCAACTTCCTTCTCCTTTGAGCATTTGACCTTAACACCATGTCCAGAAGTTGACAAGGTTGATTCTTCTATGCAAACAATACAAGAGAAACCTTGTAGTGATGAAGCATCCTCTACTGCTCTTTGTGCATCTTGCCGTAAACAAATATCTGATCAGGATTGCACTGATGTGCAAGACAGCTTGAAGTCATGGATGGTGGCAGTTGGTGAAGAAGGAAATCCTGATGGGCTCACAGATAAAATTCCAAAAcaTTTGGAAATTGTTATGAGAAATGCcatcaagagagaaaaggagcTCGAAGATGTTTGCAAGGAGCAAGCAGCTAGTATTGAGGAACTAAATAAATTGGTGGAGAAATacaaaggagaaaaggaaCTAAACTCCATCGTTGTGTATGGTCAAGAAACCAACAAGCAGACTGAATGTGAAGGGTACAACTCATTGAAAGACGAAGACAAGTTCAAGAGGGGCAACTTATTGGATATTGTAGAGGAAAATTGCGAAATAAAAGAAGTCCAGGAAGAGTCGGCCAAAAGAGACCACTCCTTTGATGCTGAAGAGAAGGAATCACTTATTAAGGAAATTCAGAATCTGAGAAGCAAGCTGCAGTTATATGGTGATGCACCGGTTAAAAAGTCTACGGAAAAGCTGAGATCCTCATTATTAATGTCAAGATCCATACAACTGCGAAAAAGTGGTGTACTTTCTGGGGAAGAGCTtgagaaggaaagagagagatggaCAGAAATGGAAAGTGACTGGATTTCTCTAACTGATGAACTGAGAGTTGATCTTGAATCCAACCGTCTTCGTGCTGAGAGGGTGGAGATGGAATTGAGGTTAGAGAAGAAGGTCACTGAAGAGCTGGATGATGCACTCAAAAGAGCAGTTCTCGGACATGCAAGAATGGTTGAACACTATGCTGAACTGCaagaaaaacataatgatTTGGCTGCAAAACACCGAGCTATAATGGAAGGGATCGCTGAGGTAAAGAAGGCAGCAGCGAAGGCCGGTAAGAAGGGACATGCTCGTTTCGCCAAATCTCTTGCTGCTGAACTTTCTGCAATGAGAGttgagagggagagggagagggaacttttgaagaaggaaaacaagAGTCTCAAGATTCAACTTAGAGACACTGCAGAAGCCGTCCATGCAGCTGGAGAACTACTCGTTAGGCTCAGAGAAGCCGAGCAAGCATCATCAATTGTAGAGGAGAATTTTGCAAATGTGCAACAAGATAATGAAAAGTTGAAGAAGCAAATGGAGAAgctcaaaagaaaacacaagatGGAGATGATTACCATGAAGCAATACCTTGCAGAGAGCAAGTTACCTGAGTCTGCACTGCAACCACTGTACCGAGAGGATTCTGATGTTGCACACAACAATGCAATCCACTATGCAGATGATGATCAGGCATGGAGAGCTGAATTTGGAGCAATCTATCAAGAACATTACTA 3608 0.3955 MRQSAETAETRFLGSLSSSSIRNLLSKSLSSKQKSSTNPKIFKSNAENTPPVDPNIEINDGQLLPTKQLQSETPTSENEVAESVAPIESPTPQEPSVKVVVRIRPVNSHGKEGDRTVKKVSSDTLCVGERKFTFDSVFDSNSDQEDIFHSVGVPLVKNALAGYNTSLLSYGQSGSGKTYTMWGPPSAMVEESSRSGHQGIVPRIFQMLFSELEKEEQTSEGKQFNYQCRCSFLEIYNEQIGDLLDPTQRNLEMKEDSKSPLYVENLTEEYVTSYEDVIQILIKGLSSRKVGATSLNSKSSRSHIIFTLVFESWCKETMSKGFSSSKTSRISLIDLAGIDRNKVDDGGRQCLKESKNVKKSLSQLGRLVDALTKETQSGKAEDIPNRNSCLTRLLRESLGGNAKLSVICSISPDNKSDGETLRTLRFGQRVRSVRNEPVINEIKEDDVNGLSDQIRKLKEELIRAKTDVYSSVRNKNGYFQGPNVRESLNQLRVSLNRSLLLPHLDNDTDEEMNVDEDDVRELSRQIDELYSSCEVIPEDISIYADCVPFSSVEDSSDVDMTSGDGIEKMEVSAERISSTPCHEDNVSSEDSQVFLDNTCAIKSTFKSSISVSPSCQSPILDEPQLSESPKIRNTQRKSMIISSSCLGSRNNVSDSSNIGKDVLGQSFKPSDHIRSSLRSSKVLPGATESLAASLQRGLQIIDCHQRNSALNKSSTSFSFEHLTLTPCPEVDKVDSSMQTIQEKPCSDEASSTALCASCRKQISDQDCTDVQDSLKSWMVAVGEEGNPDGLTDKIPKHLEIVMRNAIKREKELEDVCKEQAASIEELNKLVEKYKGEKELNSIVVYGQETNKQTECEGYNSLKDEDKFKRGNLLDIVEENCEIKEVQEESAKRDHSFDAEEKESLIKEIQNLRSKLQLYGDAPVKKSTEKLRSSLLMSRSIQLRKSGVLSGEELEKERERWTEMESDWISLTDELRVDLESNRLRAERVEMELRLEKKVTEELDDALKRAVLGHARMVEHYAELQEKHNDLAAKHRAIMEGIAEVKKAAAKAGKKGHARFAKSLAAELSAMRVERERERELLKKENKSLKIQLRDTAEAVHAAGELLVRLREAEQASSIVEENFANVQQDNEKLKKQMEKLKRKHKMEMITMKQYLAESKLPESALQPLYREDSDVAHNNAIHYADDDQAWRAEFGAIYQEHY 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02666 1202 Coils Coil 1109 1150 - -
Bva12g02666 1202 MobiDBLite consensus disorder prediction 27 52 - -
Bva12g02666 1202 Coils Coil 1064 1098 - -
Bva12g02666 1202 ProSiteProfiles Kinesin motor domain profile. 96 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 SMART kinesin_4 94 441 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 Pfam Kinesin motor domain 113 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 PANTHER CENTROMERE PROTEIN E 65 1202 - -
Bva12g02666 1202 Coils Coil 440 467 - -
Bva12g02666 1202 Gene3D Kinesin motor domain 93 473 IPR036961 -
Bva12g02666 1202 MobiDBLite consensus disorder prediction 27 95 - -
Bva12g02666 1202 PRINTS Kinesin heavy chain signature 329 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 PRINTS Kinesin heavy chain signature 162 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 PRINTS Kinesin heavy chain signature 383 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 PRINTS Kinesin heavy chain signature 293 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02666 1202 MobiDBLite consensus disorder prediction 61 82 - -
Bva12g02666 1202 Coils Coil 809 836 - -
Bva12g02666 1202 PANTHER KINESIN-LIKE PROTEIN KIN-12F 65 1202 - -
Bva12g02666 1202 Coils Coil 901 921 - -
Bva12g02666 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 465 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02666 Bva-Chr12 19588442 19594202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02666 96 433 Miscellaneous Gene Families AT4G39050 37.901 2.20e-52 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02666 K10400 - gmx:100782128 1618.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02666 12 19588442 19594202 Bva12g02666 12 19588442 19594202 ECH