Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02634 ATGAATTTGGGCGACATTAACAAGGTTTGGGAAATCAAAGCTTTGAAGAGGAAGCCTGGGGAAGAAGAAGCGAGGAAGATGTTGGAGAAGATTGCCAAACAAGTCCAACCCATTATGCGTAAACACAAATGGAGGGTCAAGCTTCTCTCTGAATTCTGCCCAGGAAATCCTTCTCTTCTGGGGTTGAATGTGGGAGCTGGTGTACATGTGAAGTTGCGGCTTCGAAGACCAAACAGGGACTGGGACTTCTTCCCGTTTGATCAAGTTTTGGATACAATGCTCCACGAACTTTGCCACAATTCCCATGGTCCCCACAATGCCAACTTCTACAAGCTTTGGGATGAACTTAGAAAGGAATGTGAAGAGCTGATGGCTAAGGGCTTAACTGGCACAGGAGAGGGTTTCGATCTTCCAGGAAGGCGCTTAGGTGGTTTCTCTCGTCAACCTCCGCTTCCTTCACTCCGTAAAACTGCACTGGCCGCTGCAGAAAAGAGAGCGCATTTAGGATCACTCATGCCATCAGGGCCTAAACGTCTTGGTGGTGACAGTGCTATCATGGGTGCACTTACTCCAGTACAAGCTGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGACATATGGTGTGGTTCTCATTCTTGTGAAATTTCAGGTGATGAAGATGTTACCTGTGATTCTAGTGAGGACCATGTACATGAGGggaaaaacacagaaaactCAAGGAGAAGAGAGACTTCTTCTCTAAATTCAGATCCTGTATCTCAAAAAAGAAGTCGTGGATCTGATCCAAGCTCAGTATTTCACTCAACTACTATTCCTTCAGAGTCCAAACTTGTGGATTTGACTATGGATACAACAAAATTTGGATCCCCCTCTGAAAATCAGACCAGATATCAAGGAAAAAATCCTGGATTTGAAAGCGTCTCACGTTCTCAGTCCAGTTCCATGGTAGGAAGTGCTATTTCTGGGGCATCATCTGGTGGCAATAGAACACTCGATTTTGAGCAACCTGAAATGTGGGAGTGTCTGGTGTGCACTTTGTTGAATAGACCTTTGGCTCCCGTATGCGAGTTGTGTGGCAAACAAAGGCCAAAAGATGTTGCTTCCAAGCATATTACTTGGTCTTGTAAATTCTGTACATTGGAAAACAGTGTGAAGTTGGACAAATGCTCAGCCTGTGATCAGTGGAGATACTCCCACGGTCCACTGGTGTCAACCCCAGCACCCAACATTGGCACCTG 1241 0.4529 MNLGDINKVWEIKALKRKPGEEEARKMLEKIAKQVQPIMRKHKWRVKLLSEFCPGNPSLLGLNVGAGVHVKLRLRRPNRDWDFFPFDQVLDTMLHELCHNSHGPHNANFYKLWDELRKECEELMAKGLTGTGEGFDLPGRRLGGFSRQPPLPSLRKTALAAAEKRAHLGSLMPSGPKRLGGDSAIMGALTPVQAAAMAAERRLQDDIWCGSHSCEISGDEDVTCDSSEDHVHEGKNTENSRRRETSSLNSDPVSQKRSRGSDPSSVFHSTTIPSESKLVDLTMDTTKFGSPSENQTRYQGKNPGFESVSRSQSSSMVGSAISGASSGGNRTLDFEQPEMWECLVCTLLNRPLAPVCELCGKQRPKDVASKHITWSCKFCTLENSVKLDKCSACDQWRYSHGPLVSTPAPNIGT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02634 413 MobiDBLite consensus disorder prediction 223 245 - -
Bva12g02634 413 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 413 - -
Bva12g02634 413 MobiDBLite consensus disorder prediction 219 310 - -
Bva12g02634 413 ProSitePatterns Zinc finger RanBP2-type signature. 340 359 IPR001876 -
Bva12g02634 413 SMART zf_4 372 396 IPR001876 -
Bva12g02634 413 SMART zf_4 338 362 IPR001876 -
Bva12g02634 413 ProSitePatterns Zinc finger RanBP2-type signature. 374 393 IPR001876 -
Bva12g02634 413 Pfam WLM domain 8 204 IPR013536 -
Bva12g02634 413 ProSiteProfiles Zinc finger RanBP2 type profile. 336 365 IPR001876 -
Bva12g02634 413 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Bva12g02634 413 SUPERFAMILY Ran binding protein zinc finger-like 336 363 IPR036443 -
Bva12g02634 413 Gene3D - 334 371 - -
Bva12g02634 413 MobiDBLite consensus disorder prediction 246 310 - -
Bva12g02634 413 PANTHER ZINC ION BINDING PROTEIN 1 413 - -
Bva12g02634 413 Pfam Zn-finger in Ran binding protein and others 338 360 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02634 Bva-Chr12 19416580 19419264 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02634 K22685 - gmx:100795976 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02634 12 19416580 19419264 Bva12g02634 12 19416580 19419264 ECH