Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02618 ATGCAGCTCCGGCCGGTGACCGCCGCAAGGATTCTCGTCGTCACGGTGTTTCTGATCGTTTCAGCGGCGCACGGCCACAACATCACGCGCAAGGTTATACATTCCCATGTAACGGAAACCCCTACGCCCGCACCCACCCAGCAAAACCTCATGACGACCATCATGTCCAAGCATGGCTGTAAAGTCTTCGCCGACACACTTCTCGCTGACGATGCTGAAAAGACCTTCGAGGACAATATCGGCGGAGGATTAACGGTGTTTTGCCCTACGGACGACGCGTTCAAAGCTTTTTGGCGCAAGTACAAGAACTTGTCGGCGGAGGGGAAGACGGCGTTGCTAGAGTACCACGGCGTTCCGGTGTACCAGTCGCTGGAAACGTTAAGGTCAAACAACGGCTTGCAGAACACTCTGGCTACTGACGGAGCTAACAACTACGACTTGACGGTGCAGAACGACGGTGAGCAAGTGACGCTAAAGACCAAGATCACGACCGCGAGGATTACCGGAACGCTTCTCGATGAGGAGCCGCTGGCGATCTTCACCATCGACAAGGTTCTGTTGCCCAGAGAGTTATTCAAGGCGAAGGCACCAACACCATCACCGGCCCCTGCTCCTGAACCGGCAGCGGCGGATGCGCCTGAGACACCGAAGAAGAAGGGGGCACCGCCGCCGCATGACTCAGATTCGGATGCGCCAGCTGATTCGCCGGATGATGCTGCGAATGAGAGGGCAGCTGACGATAACAGTGCCGTAGGATTTGGCGGTGTTGGTTACGTTACGGCGGGACTTGCTTTGGTTTTCGGATTTTTACAGCTGTG 818 0.5611 MQLRPVTAARILVVTVFLIVSAAHGHNITRKVIHSHVTETPTPAPTQQNLMTTIMSKHGCKVFADTLLADDAEKTFEDNIGGGLTVFCPTDDAFKAFWRKYKNLSAEGKTALLEYHGVPVYQSLETLRSNNGLQNTLATDGANNYDLTVQNDGEQVTLKTKITTARITGTLLDEEPLAIFTIDKVLLPRELFKAKAPTPSPAPAPEPAAADAPETPKKKGAPPPHDSDSDAPADSPDDAANERAADDNSAVGFGGVGYVTAGLALVFGFLQL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02618 272 SMART fasc_3 85 189 IPR000782 -
Bva12g02618 272 SUPERFAMILY FAS1 domain 43 189 IPR036378 -
Bva12g02618 272 ProSiteProfiles FAS1/BIgH3 domain profile. 47 186 IPR000782 -
Bva12g02618 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 31 251 - -
Bva12g02618 272 MobiDBLite consensus disorder prediction 218 244 - -
Bva12g02618 272 Gene3D FAS1 domain 23 189 IPR036378 -
Bva12g02618 272 MobiDBLite consensus disorder prediction 195 251 - -
Bva12g02618 272 Pfam Fasciclin domain 60 188 IPR000782 -
Bva12g02618 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 31 251 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02618 Bva-Chr12 19353762 19354814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02618 - - lang:109350304 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02618 12 19353762 19354814 Bva12g02618 12 19353762 19354814 ECH