Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02616 ATGTCTCTGGGCTATGCCGAGAAGCTTTCCTTCATAGAGGATGTGGGCAACGTAGGAATGACCGAATATTTCGACGCACCTCATGCTTTGCGGGAAAAAAGAGAACGACTTGCTACCATGATAAAAAAGAGTAAACATCTAGTGGTGTTTACCGGAGCAGGAATATCCACTTCTTGTGGAATACCTGATTTTAGGGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCATTACCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCCAGCTTGACTCACATGGCATTGGTTGAGTTAGAGAGGGCTGGTATTTTGAAGTTTGTTATCAGTCAGAATGTTGATGGTCTCCATCTTCGTTCTGGAATACCAAGGGAGAAGCTAGCTGAATTGCATGGGAACTCTTTCATGGAAACTTGTCCTTCCTGTGGAGCTGAGTACCTACGGGATTTTGAGGTGGAAACTATTGGCTTGAAAGAAACATCAAGGCGCTGTTCAGATCCAAAATGCGGAGCAAGACTTAAGGATACTGTTCTTGACTGGGAGGATGCATTGCCTCCGAAGGAGATGGATCCAGCTGAGAAGCACTGCAAGATGGCAGATATTGTATTATGCTTAGGGACCAGTCTGCAAATAACTCCAGCATGTAACCTGCCTCTGAAAGCACTTCGTGGTGGGGGCAAAGTTGTTATTGTGAATCTCCAgAAGACTCCAAAGGACAAAAAAGCCAGTTTAGTTATTCATGGGCTAGTAGATAAgGTGATTGCAGGCGTCATGGACTTTCTTAATCTACAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATCATTATCACACAAGCCTTGAGTCTGGCAGATAAAAGATATGTAAACTGGACTCTCCAGGTTGCAAGTGCACATGGGCAAAAAGCAACATTACCATTCATCAAGTCTGTGGAGGTCTCCTTCTTAGACAAGGAAGACTATAAAGCAGCTTTACTGGACAAGCAACCATTTCGGCTTAAAAGGAGAACGGTATGGGACAAAGCATTTGAAATGGTTCTGAAGCTCAACTTCAGCAATGGTTGCGGTTGCTCGTCCATTGAAATTGATGTCCCGGTAGATTTTAAGGTTTCTACCGACTGCTTTAACTTTGATAAGGATGTGATATTCCAAAAGCTGAGAGACAAGGCTATTGTTGAATCAAGATGTGGGCAGAACGCTGTTATTGAGAGAAAGAGCATCTTGACACCCAAGAGTGGTGTTACAGTCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAGAACATTGTCTGATTCTCTGAGCAATGGAGATCTTAAAAAACGTAAAGAAAGTGTAAATGGTGTAGAGTCATCTAGGAAGCGTTCAAGTGGTTCTAAGCGTAAATCTAGATCATA 1418 0.4316 MSLGYAEKLSFIEDVGNVGMTEYFDAPHALREKRERLATMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELERAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYLRDFEVETIGLKETSRRCSDPKCGARLKDTVLDWEDALPPKEMDPAEKHCKMADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGLVDKVIAGVMDFLNLQIPPFVRIDLFQIIITQALSLDKRYVNWTLQVASAHGQKATLPFIKSVEVSFLDKEDYKAALLDKQPFRLKRRTVWDKAFEMVLKLNFSNGCGCSSIEIDVPVDFKVSTDCFNFDKDVIFQKLRDKAIVESRCGQNAVIERKSILTPKSGVTVYAIVTNVVQYSKTCRTLSDSLSNGDLKKRKESVNGVESSRKRSSGSKRKSRS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02616 471 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 470 - -
Bva12g02616 471 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Bva12g02616 471 MobiDBLite consensus disorder prediction 443 462 - -
Bva12g02616 471 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 470 - -
Bva12g02616 471 CDD SIRT7 45 252 - -
Bva12g02616 471 Gene3D - 37 261 - -
Bva12g02616 471 Gene3D - 135 184 - -
Bva12g02616 471 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Bva12g02616 471 Gene3D YEATS domain 276 383 IPR038704 -
Bva12g02616 471 MobiDBLite consensus disorder prediction 443 471 - -
Bva12g02616 471 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Bva12g02616 471 Pfam Sir2 family 87 216 IPR003000 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02616 Bva-Chr12 19338450 19346873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02616 K11416 - gmx:100803586 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02616 12 19338450 19346873 Bva12g02616 12 19338450 19346873 ECH