Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02611 ATGTCGGAAAAGGGTCGACCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCTGCCTCAGCTGAGGGATTCACGGTGATCTTTAACAAAGCCAGGGATGAGAAAAAGACAGGTGGCAAACCTGAGTCTCCAGGAAAGGCTGATCCTCAAAGCAGACCTGCAACTGCAATAGATCATGGCAAACCTCAGAGTAAAAAATGGTTTTGCTGCTTAAACCCTCCAGCAGAATCGTA 236 0.4619 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADPQSRPATAIDHGKPQSKKWFCCLNPPAES 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02611 78 MobiDBLite consensus disorder prediction 31 78 - -
Bva12g02611 78 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 2 58 - -
Bva12g02611 78 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Bva12g02611 78 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 2 58 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02611 Bva-Chr12 19312369 19315617 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02611 - - mnt:112093374 137.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00590 12 7780558 7784387 Bva12g02611 12 19312369 19315617 BWGD
Bva12g02611 12 19312369 19315617 Bva12g02611 12 19312369 19315617 ECH