Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02610 ATGAAGCTTGGCTTACCCAATTTCATGGTTGCATTGTTTCTGCTCTTATCAAGCCTGAATGCAGTGTTTGGGATCAGATTTGTGATTGAGAAAGAAGAGTGTTTCTCTCATAATGTTCAGTATGAAGGAGATACAGTCcatgtttcttttgttataaTGAAGGTGGATTCATCTTGGCATTTCAATGAAGAAACTGTTGATCTCGTGGTGAAGGGACCTTTAGGTGATCAAATTCAAGATGTTCGTGACAAGACGAGTGAGAAGTTTGAATTTGTGGCTCGGAGCAAAGGGCTTCATCGTTTCTGCTTCATCAACAAGTCTCCCTTTCATGAAACCATAGATTTTGATGTACATGTCAAACACTTTTCATACTATGATCAGCATGCCAAAGATGAGCATTTCAATCCTTTGTTAGAACAGATTTCTAAGCTGGAGGAAGCTCTTTACAACATCCAGTTTGAACAGCATTGGCTAGAGGCTCAGACTGAACGCCAAGCCGTAGTAAACAACGCAATGAGCCGCAGAGCtattacaaaggcattgtttGAATCAGGAGCGCTAATTGGTTCCAGCATCCTCCAAGTTTATCTTCTTCACCGCCTCTTTGAAGGAAAATTTGGGCCATCTAGGGTCTA 635 0.3969 MKLGLPNFMVALFLLLSSLNAVFGIRFVIEKEECFSHNVQYEGDTVHVSFVIMKVDSSWHFNEETVDLVVKGPLGDQIQDVRDKTSEKFEFVARSKGLHRFCFINKSPFHETIDFDVHVKHFSYYDQHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAVVNNAMSRRAITKALFESGALIGSSILQVYLLHRLFEGKFGPSRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02610 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Bva12g02610 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Bva12g02610 211 Pfam emp24/gp25L/p24 family/GOLD 30 203 IPR009038 -
Bva12g02610 211 PANTHER TMP21-RELATED PROTEIN-RELATED 20 205 - -
Bva12g02610 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 20 205 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02610 Bva-Chr12 19310105 19312368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02610 - - qsu:111993953 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02610 12 19310105 19312368 Bva12g02610 12 19310105 19312368 ECH