Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02604 ATGTCGATGATGGCTACCAGCAACCGAGACAGAGAAGACGCTCTGACATTCACGAACCCGTCGTCGTCTTCTTCGCCAATCACAGTTTCCGACCAGCTAGATAGCTACCTCACGGACCCTAGTTCCCGTATCGGAAGCGCCTCCGGGAGTTTCCAGAACGAGGGCTTGCTCGGTGGCGCTGCTGAAACCGGTAGCAGCAACAGCGACGCCGAGTTCGGATTCTTGCGGCCTGATTTCCGGCAAAGTCCGCTTGTGGGGACCGTTGAGTTCTATCAAAGacatgtctttctttgttacaaGAACCCTCGGTTTTGGCCGCCGCGCATCGAGGCGGCCGAGTTTGATCGCTTGCCTAGGTTGCTCTATGCTGCCGTGATGGCCAGGAAGAATGATATGGGGAAGCAGACTCATTTGACAATATGTGAGGGGCATGATGGAACTGAAACTTCAAATGGAGATATATTAATCTTTCCCGACATGATCAGATACAGGAGATTGACACATTTTGATGTTGAAACATTTGTCGAAGAAGTGCTTGTGAAGGATGGTGAGTGGCTTCCTGGAACTCCTGAAGCCTTAAAGGGTGCACATGTTTTTGTCTGTTCGCATGGATCCCGTGATCGCAGATGTGGTGTCTGTGGACCTGTTTTAGTGAGTAGATTTAGGGAAGAGATAGAATTACATGGTCTTCAAGGTAAAGTGTTTGTTAGCCCATGCTCGCACATTGGAGGCCATAAGTATGCAGGAAATGTCATTATATTCAGACGAAATGTCAATGGACAAGTCACTGGGCACTGGTATGGATATGTCACACCGGATGATGTGCCTTTATTGCTTCAATGGCATATTGTAAATGGGGAGATTTATGACTTTCTGTGGagGGGTCAGATGGGTTTATCAGAAGaggagcaaaagaaaaatcaagaacAAAGGCTTCGACTTAATGGCATAAGAAATGTAGACGAAAGTGCTGAAGCGTTGATGCAGATGAATCACGAGATAAGGAATGTTGTGTATGGATCTCAAGACAACTTTTCGGGCTGCTGCCAAGCAAATGGACTGAGCTGCTGCCAAGCAAATGGACTGAGCTACTGCCAAGAGAATAAAGATTCACCCTGCTGTCAGAATGATGCGTCAGTGGAAAGAAGTAATGCTGATGCGATTGAGGCAGAAGCAAAGCTCTCAGCAGAAAATAAGAGCAAAAGGGCAGTGATTTCCCGAATCATTAGTGCTAAAGGAGCTTCACGCAAATTTCGTTCCATGCCAACATGGCTAGACAGCTGGGAGCGAGAAGATACATATGCTGCGCTTGCTGTTGTCTGTGCTGCTGTTTCAGTTGCCATTGCCTATAGCTGCTACAAACACATTTTTCTGTA 1376 0.4593 MMATSNRDREDALTFTNPSSSSSPITVSDQLDSYLTDPSSRIGSASGSFQNEGLLGGAAETGSSNSDAEFGFLRPDFRQSPLVGTVEFYQRHVFLCYKNPRFWPPRIEAAEFDRLPRLLYAAVMARKNDMGKQTHLTICEGHDGTETSNGDILIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALKGAHVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGHKYAGNVIIFRRNVNGQVTGHWYGYVTPDDVPLLLQWHIVNGEIYDFLWRGQMGLSEEEQKKNQEQRLRLNGIRNVDESAEALMQMNHEIRNVVYGSQDNFSGCCQANGLSCCQANGLSYCQENKDSPCCQNDASVERSNADAIEAEAKLSAENKSKRAVISRIISAKGASRKFRSMPTWLDSWEREDTYAALAVVCAAVSVAIAYSCYKHN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02604 454 MobiDBLite consensus disorder prediction 1 30 - -
Bva12g02604 454 Pfam Sucrase/ferredoxin-like 82 293 IPR009737 -
Bva12g02604 454 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 67 453 IPR009737 -
Bva12g02604 454 CDD TRX_Fd_Sucrase 193 295 IPR009737 -
Bva12g02604 454 SUPERFAMILY Thioredoxin-like 194 297 IPR036249 -
Bva12g02604 454 Gene3D Glutaredoxin 193 292 - -
Bva12g02604 454 PANTHER SUCRASE-LIKE PROTEIN 67 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02604 Bva-Chr12 19284381 19287578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02604 - - gmx:100816329 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01150 12 11077236 11081297 Bva12g02604 12 19284381 19287578 BWGD
Bva12g02604 12 19284381 19287578 Bva12g02604 12 19284381 19287578 ECH