Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02603 ATGGGTGTTAGGAACCAGGAGGCAATCAAGCAATTCCTGTCCATGATTGAGGACGTGGATGAGCAACTGAAGAACTCATTCCAGAATATGCACCAGGGCTACCGTGCTGAGACATTAGAACGGTTTCTCAAAGCAAGGGACTGGAATGTTTCCAAAGCCCATAAAATGTTGGTTGATTGTTTAAATTGGAGAGTACAAAATGAGATTGACAATGTTTTAGCGAAGCCAATCCCCACTGATTTGTATAGAGCCGTGCGAGATTCTCAACTCATGGGCATGTCTGGTTACTCAAATGAGGGTCTACCTGTCATTGCTGTTGGTGTTGGGCTCAGCACATACGACAAAGCATCTGACAAATACTACGTACAGTCACACATCCAAATGAATGAATACAGAGATCGTGTGATATTGCCATTAGCTACAAAGAAACATGGACGGTATATCGGCACCTGTGTGAAAGTATTGGATATGACTGGCTTAAGACTATCGGCACTAAGCCAATTGAGGCTTTTGACTGCGATATCTACCATAGATGACCTGAACTACCCAGAAAAGACTGACACATATTATATTGTAAACGTGCCATATGTATTCTCAGCATGTTGGAAGGTTGTAAAACCTCTTTTGCAAGAGAGAACAAGGAAGAAAATCCAGGTCCTGCAAGGTTGTGGGAGGGAGGAACTACTGAAGATTATGGACTATTCATCCCTCCCACACTTTTGTAGAAAAGAGGATTCCAAGTCATCCAGAGACAATGCTGCAATTAATGCTGaaaattgtttctcttttgaCCATGCCTTCCATCAAAAAATCTACAATTTCATCAAGCAGCAAGCTCTCATTCTGGAATCTACCTCACCTATCAAACGAGGGTCTTTCTTTGTGGACTTGCCAGAGCCAGACCCAGATGATGCCAAAATTGCCAAAACCATTGAAAATGAGTTCCACAGATTGGAAAAGCAGAATGGCCTTACCAATTCACTAAATGGCCTTGTGGTTAATGGTAATTG 1010 0.4178 MGVRNQEAIKQFLSMIEDVDEQLKNSFQNMHQGYRAETLERFLKARDWNVSKAHKMLVDCLNWRVQNEIDNVLAKPIPTDLYRAVRDSQLMGMSGYSNEGLPVIAVGVGLSTYDKASDKYYVQSHIQMNEYRDRVILPLATKKHGRYIGTCVKVLDMTGLRLSALSQLRLLTAISTIDDLNYPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRKKIQVLQGCGREELLKIMDYSSLPHFCRKEDSKSSRDNAAINAENCFSFDHAFHQKIYNFIKQQALILESTSPIKRGSFFVDLPEPDPDDAKIAKTIENEFHRLEKQNGLTNSLNGLVVNGN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02603 336 Gene3D - 3 269 IPR036865 -
Bva12g02603 336 PANTHER OS09G0258000 PROTEIN 1 335 - -
Bva12g02603 336 Pfam CRAL/TRIO, N-terminal domain 9 59 IPR011074 -
Bva12g02603 336 CDD SEC14 82 240 IPR001251 -
Bva12g02603 336 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Bva12g02603 336 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Bva12g02603 336 SUPERFAMILY CRAL/TRIO N-terminal domain 6 73 IPR036273 -
Bva12g02603 336 PANTHER - 1 335 - -
Bva12g02603 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Bva12g02603 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Bva12g02603 336 SMART sec14_4 78 246 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02603 Bva-Chr12 19279162 19283624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02603 1 329 Acyl Lipid Metabolism Gene Families AT5G47730 64.545 1.12e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02603 - - gmx:100817955 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01151 12 11081942 11086584 Bva12g02603 12 19279162 19283624 BWGD
Bva12g02603 12 19279162 19283624 Bva12g02603 12 19279162 19283624 ECH