Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02599 ATGTGTCACCCTAACTTTTGTGAATTAGTTTTTCAACTACTGTACGAAGCCTATAGATATTTCCGTGGTGGCAGTTCAAATTGTTGTCCTGCCATTTGGCAAGCTCATGGCCACAACTCTTCCATCGGAAAAGATTCGAGTCCCCTTGACGAAGAGGTCGTTTTCAATCCCGCGCCATTCAACAAGAAGGAACACGTGCTGATAACACAGCAAAGAAGATATCTCAaaataaaaagattgcTGCTTCAATTTCCAATGAAATCTGATAGATTTCTAATAAATGACAATGCACTCTATGAAGATGAGAAAATACCTAAAGGGGGATACAGTGGGTTGCAATTCTTCTTCTTAGTCTTTGTATCAAACTtcgcatattacatcattccgGGCTATCTCTTCCCCTCAATAGCATCTATCTCGgttgtttgtttgatttggaAGAATTCCGTCACTGCACAACAGATTGGTTCAGGCAACATGGGTCTTGGTGTTGGCTCATTCAGCCTTGATTGGAACACCACTGCTGGATTCCTGGGCAGCCCTTTGGTTGTTCCTAGCCATGTCACAGTCAATGTGCTGGTTGGGTTTGCTCTCTTTGTTGACATTATTATGCCCATTGCTTATTGGACTGATGCATATGATGCCAAGAAGTTTCCCCTCTTCAGCTCTCGCAAATTCGATTCCACTGGTGCAAAGTATAATGTTACTCGGATTCTAAATGAAAAGACCTTTGATATCAACTTGGAGAGTTATAACAATTACAGCAAACTGTATTTAAGTCCATGGCTTGCTTTTGGTTATGGGTTGAGCTTTGCCACTTCAACTTCTACTCTTACACATGTTGCTCTCTTTCATGGAAAAGAGATTTTTTCTATGTGGAGGGAGACGAAAGATTCACTAGCAGATCAATTGGAAAGATTTGCTTGCGAAGGCTTTTGGCTAACAACTCCAGCTACCATGGTGGggattctttctttctttagcaATTGCCTGGTTTTCACCTTGCCCATTGGGATTATTCAAGCTACAACAAACCAGCACGTTACACGCCCTTTGGTTTGTTGGAGACTTCAAACTAGGCCACTACAAGAAAATCCTCCAAGGGCCATGTTCATTGTGCAGCTGGCTGGCACACTAGTTGCTTCAACAACTTACTTCGGCGCGGCATGGTGGCTCCTTACAAGCATTGAGCAAATCTGTGATCCTGCTCTGTTGCCGGAGGGGAGTCCATGGACGTGCCCCGGTGACGATGTTTTCTACCATGCTTCAATCATATGGGGAGTTATAGGGCCACACAGAATGTTTGGTAACCAGGGTCTGTACTCTGAGATGAACTGGTTTTTTCTCATTGGTATAGTTGCTCCTATTGAAGTGTGGCTTCTTGCACGCAAATTCCCCAGTCAAAAGTGGATTGAGCTGATAAACATGCCCACTATCTCCTCTGCAACAGCAGGCATGCCACCAACCAAatctgtttattttatatcttggGGAGCAGTGGgacttttcttcaatttttacgTTTACAGAAAGTTAAAGGGGTGGTGGGCAAGATACAATTATGTCCGTTCAGGTGCCTTGCAAGCTGGGGTTGCTTTCACTGCcttgcttctcttttttgctCTCCAATCCTATGATATCATTGGTCCCAACAGGTGGGGACTTGAAAATGATGACCACTGCCCATTGGCCAAGTGCCCCACAGCACCAGGGATCAGAGCCAAGGGATGTCCTACTCTTTA 1742 0.415 MCHPNFCELVFQLLYEAYRYFRGGSSNCCPAIWQAHGHNSSIGKDSSPLDEEVVFNPAPFNKKEHVLITQQRRYLKIKRLLLQFPMKSDRFLINDNALYEDEKIPKGGYSGLQFFFLVFVSNFAYYIIPGYLFPSIASISVVCLIWKNSVTAQQIGSGNMGLGVGSFSLDWNTTAGFLGSPLVVPSHVTVNVLVGFALFVDIIMPIAYWTDAYDAKKFPLFSSRKFDSTGAKYNVTRILNEKTFDINLESYNNYSKLYLSPWLAFGYGLSFATSTSTLTHVALFHGKEIFSMWRETKDSLADQLERFACEGFWLTTPATMVGILSFFSNCLVFTLPIGIIQATTNQHVTRPLVCWRLQTRPLQENPPRAMFIVQLAGTLVASTTYFGAAWWLLTSIEQICDPALLPEGSPWTCPGDDVFYHASIIWGVIGPHRMFGNQGLYSEMNWFFLIGIVAPIEVWLLARKFPSQKWIELINMPTISSATAGMPPTKSVYFISWGAVGLFFNFYVYRKLKGWWARYNYVRSGALQAGVAFTALLLFFALQSYDIIGPNRWGLENDDHCPLAKCPTAPGIRAKGCPTL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02599 580 PANTHER ISP4 LIKE PROTEIN 366 579 IPR004648 GO:0055085
Bva12g02599 580 PANTHER ISP4 LIKE PROTEIN 97 304 IPR004648 GO:0055085
Bva12g02599 580 Pfam OPT oligopeptide transporter protein 109 305 IPR004813 GO:0035673
Bva12g02599 580 Pfam OPT oligopeptide transporter protein 366 541 IPR004813 GO:0035673
Bva12g02599 580 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 365 543 IPR004813 GO:0035673
Bva12g02599 580 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 366 579 - -
Bva12g02599 580 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 97 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02599 Bva-Chr12 19260391 19263122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02599 55 580 Organic Solute Cotransporters AT5G55930 45.669 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02599 - - mnt:21392257 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02599 12 19260391 19263122 Bva12g02599 12 19260391 19263122 ECH