Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02598 ATGGGTGGAGATTTGAAGTATGAGATTGCACAGAACGCGTACATAAAGCTCGTGCTACACTCCCTGAAGCACAAGACCTCCGCCGTCAACGGAATTTTGATCGGCCGCGTTTCACAGGAAAACGGCATCGTTGAGATCTCTGATGCAGTTCCTCTTTTCCACTCTCAAATTGGTCTTCTTCCACAACTAGAGATCTCCCTTATTCTGATAGAGGAATACTTTTCTGCTAGAGGCTTGAACATCATTGGCCATTTTCACGCCAATGAGAGATTTGATGACTTCGGCCTTGGAGGTGTGGCGAAGAACATTGGTGATCACATCTGCCGGTACTTTCCTCAAGCTGCCATCCTTTTGTTAGATAACAAGAAGCTTgaagctttaaaaaaaagcaaggACCGCAGTGCCATTATGCAGCTTTATGTTAGGGATGCATCTAAAAACTGGAAGCTGATTCAGTCTGATGGAAACAATGGATTGACTACCAAGGAGCCATCAGCAAATCTGGTATTATTGGACTATATTTCTACTGAGAAATGGGACCAAATTGTAGATTTTGATGACCACCTTGATGACATAAGCAAgGATTGGCTAAACCCAGGACTCTTCAACTG 611 0.4239 MGGDLKYEIAQNAYIKLVLHSLKHKTSAVNGILIGRVSQENGIVEISDAVPLFHSQIGLLPQLEISLILIEEYFSARGLNIIGHFHANERFDDFGLGGVAKNIGDHICRYFPQAAILLLDNKKLEALKKSKDRSAIMQLYVRDASKNWKLIQSDGNNGLTTKEPSANLVLLDYISTEKWDQIVDFDDHLDDISKDWLNPGLFN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02598 203 CDD MPN_UPF0172 9 198 IPR005366 GO:0072546
Bva12g02598 203 Pfam Uncharacterised protein family (UPF0172) 6 200 IPR005366 GO:0072546
Bva12g02598 203 PANTHER BNAA03G11160D PROTEIN 3 203 - -
Bva12g02598 203 ProSiteProfiles MPN domain profile. 7 138 IPR037518 -
Bva12g02598 203 Gene3D Cytidine Deaminase, domain 2 6 94 - -
Bva12g02598 203 PANTHER ER MEMBRANE PROTEIN COMPLEX 3 203 IPR005366 GO:0072546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02598 Bva-Chr12 19257905 19260077 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02598 K23569 - gmx:100527135 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02598 12 19257905 19260077 Bva12g02598 12 19257905 19260077 ECH