Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02571 ATGGCATCTCTGCGTCCTGTTCTTTTTCAAGTTAATTTAACTGTGATCTTTAATAGTGCCATTGCTAATCCTATGGTGGAAAACGTGAAAGCATTGCTTGAGGTAGAGACGAGAGTGCCTATTCTGCAACAGCAACTTTTGTTTTACGGCAGGCAGATGGGGAATTCTCAGAAATTAAGCGAGCTTGGTGTCAATGATGAAGATTTGGTGACGATGGTTACTTCTGCTGCTTCTGGTAATGATATGGGCTTAAATCCTGATGGATCTGCTATTAACCCTGGGGCTTTCCAGCAGCACATTAGAAATGATGCTAACTTGATGGGTCGGCTCTTTCAGATCGATCCAGAGTTGGCACAAGCTGTTCTAGGGAATGATCTTAATAGACTGCAGGAAATTTTACGAATGCGTCACCAGCAAGGATCTGAACTACGGCGTAAAAGAGATGAGGAGCTTGCTTTTCTTTATGCAGATCCTTTTGATGTTGAAGCTCAAAGGAAGATTGAAGCTGCCATCCGCCAGCAAGGAGTTGATGAAAACTGGGCAGCTGCACTAGAACATAATCCTGAAGCCTTTGCAAGGGTGGTATGTATAATTTCATACTCATTTATCCTTTCCATTGCTAAtgtcattgttatttttatttttgcaatgACTTTGTATGTACTTCACGTCATGTTATATGTTGGCATGGAAATTAACGGTGTTCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCTACCATTATATCAAAAAGCTGTGCTGAGCGTTGTGGATTGTTGAGACTACTGGATCAGCGTTACAAAGGAATTGCTCATGGAGTCGGCCAATCAGAGATTTTGGTCATTGGGAATATATTTTACCCTTGCTCATTCTTAGTGTTAGATTCACCTAATATGGAGTTCCTCTTTGGACTGGATATGCTCAGGAAGCACCAGTGTAGTAtagatttaaaagaaaatgttttgagAGTCGGTGGAGGAGAGGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCTTCTGGGTTTCTAGGTGATGAAAGGTATTCTGGGCAAAGTTCCAGCTCAGGTGCTCCTGTGACGTCGGGAACAACTGACAAGAACAATAATGCACCAAAAGGAGGCCAGTCTTCTGgagGTGCTGGTGGTGGCACAGCTCAGGGTTTGGAAGAGAAGCAGTTATACAAAGCTCTCAAGTTATTCAATGGCAATGAGGAACAGGCAGctggttttctttttagtgGTTG 1250 0.4096 MASLRPVLFQVNLTVIFNSAIANPMVENVKALLEVETRVPILQQQLLFYGRQMGNSQKLSELGVNDEDLVTMVTSAASGNDMGLNPDGSAINPGAFQQHIRNDANLMGRLFQIDPELAQAVLGNDLNRLQEILRMRHQQGSELRRKRDEELAFLYADPFDVEAQRKIEAAIRQQGVDENWAAALEHNPEAFARVVCIISYSFILSIANVIVIFIFAMTLYVLHVMLYVGMEINGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYKGIAHGVGQSEILVIGNIFYPCSFLVLDSPNMEFLFGLDMLRKHQCSIDLKENVLRVGGGEVSVPFLQEKDIPSGFLGDERYSGQSSSSGAPVTSGTTDKNNNAPKGGQSSGGAGGGTAQGLEEKQLYKALKLFNGNEEQAAGFLFSG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02571 416 MobiDBLite consensus disorder prediction 348 384 - -
Bva12g02571 416 MobiDBLite consensus disorder prediction 346 387 - -
Bva12g02571 416 ProSiteProfiles Ubiquitin domain profile. 26 79 IPR000626 GO:0005515
Bva12g02571 416 Gene3D Acid Proteases 223 343 IPR021109 -
Bva12g02571 416 SUPERFAMILY Ubiquitin-like 23 79 IPR029071 -
Bva12g02571 416 PANTHER AT13091P 224 414 - -
Bva12g02571 416 PANTHER AT13091P 25 195 - -
Bva12g02571 416 PANTHER ASPARTYL PROTEASE DDI-RELATED 224 414 - -
Bva12g02571 416 PANTHER ASPARTYL PROTEASE DDI-RELATED 25 195 - -
Bva12g02571 416 CDD RP_DDI 181 325 IPR019103 GO:0004190|GO:0006508
Bva12g02571 416 Pfam Ubiquitin family 26 75 IPR000626 GO:0005515
Bva12g02571 416 Pfam Aspartyl protease 222 317 IPR019103 GO:0004190|GO:0006508
Bva12g02571 416 SUPERFAMILY Acid proteases 219 318 IPR021109 -
Bva12g02571 416 Gene3D - 20 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02571 Bva-Chr12 19132574 19137268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02571 K11885 - pop:7457658 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02571 12 19132574 19137268 Bva12g02571 12 19132574 19137268 ECH