Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02569 ATGGCTTCTCCTGGGAACCCAAATCAGCCTCCGGCGCCATTCGATATGCACAAGTTCTTTAAACCCACAAACCCACCTTCGAGCCCTTCTTCGCAGAACCCTTCACCCTTTCCAccctcttcctcttttcttccttctgcTCCTCCTCCTTCATCTGCATCTTATCCTCCTCCCTCTGGTCCCTATTCATACCCTCCTCAAACGACACCGTTTCATCACCAGTTCGCCCAGCATCACGTTCCCTACTCGCAGGACCAGCTCCACCCCAACTTGCATCACCAGAGGTCTATCTCCTTCCCCACCCCTCCTCTTCAGCCTCAACCCATGCCTCCTCCTTCTGCACCCACCAACCCCAACGCCGGTGCTCGGCTAATGGCGTTGCTTAGTGCCCCCGCTTCTTCGGAATTGCCGCCTCAACCTTCTGCTCCTTTGCATTCGATTCATCCTCCTTCTTCTGGGGTTCCTGAATTTGTAGTCCCTGGCAATTTGCCGGCGATGCCAACAATGGCCATGTTGAATCCGGGAATGGCTTCTCCGGGCCCAATTCGTATGCCGAGCAGTAAGCTCCCAAAGGGGCGGCATTTGGTGGGCGATCATGTTGTGTACGATGTGGATGTAAGGCTGCCAGGTGAGGTGCAGCCTCAGCTTGAAGTTACTCCCATAACCAAGTATGGATCAGATCCTCAGCTTGTTTTGGGTCGTCAAATTGCGGTCAATAAATCGTATATATGCTATGGATTGAAACAGGGAAACATCCGGGTTCTTAATATTAATACTGCACTGAGATCTTTACTTCGAGGCCACACTCAGagGGTCACAGATTTGGCTTTCTTTGCTGAAGATGTTCACCTTTTGGCTAGTGTTGGCATAGATGGTCGGGTATATGTGTGGAAGATCTCTGAAGGTCCAGATGAAGAAGATAAGGCTCAAATTACTGGAAGTATTGTTGTTGCTATTCAGATAGTAGGAGAGGAGGAGGCTGCAAATCCCCGAATTTGCTGGCACTGCCACAAACAAGAAGTTTTGGTTGTTGGTATAGGAAAGCGTATTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTATGTAGCAGAGGAGCCTATCAGGTGTCCTGTTGACAAGCTCATTGATGGAGTTCAGCTTGTAGGTAAACATGACAGGGAGGTGACTGATTTGTCAATGTGTCAGTGGATGACAAATCGATTGGTATCTGCATCACTGGATGGCACGATAAAAATCTGGGAAGATCGCAAGGCACAACCACTTGTTGTATTGAGACCACATGATGGACAGCCTGTTTATTcttctacattttttattgCTCCACATCGGCCTGATCATATTGTACTTATCACAGGGGGCCCACTAAATCGGGAAGTAAAGGTCTGGGCCTCAGCAAGTGAAGAAGGTTGGCTATTACCAAGCGATGCTGAGTCATGGAAGTGCACACAGACATTGGACTTAAAGAGTTCTGCTGAACCTCATGTGGAAGATGCATTCTTTAATCAAGTTGCAGCATTATCCCAAGCAGGTCTTCTTTtacttgcaaatgccaagagGAATGCTATATATGCAGTGCACTTAGAATATGGTCCTAACCCTGCTGTAACTCAAATGGATTATATAGCAGAATTTACTGTGACTATGCCTATTCTGAGTTTTACGGGGACAAGTGATATATTACCTCATGGTGACCATATTGTTCAGGTTTATTGTGTCCAGACACAGGCTATTCAACAGTATGCTTTGGACTTAGCCCAATGCTTGCCTCCACCACTGGAAAATGTGGGACTAGAGAAGTCAGACTCCTGTGTTTCCCGAGATGCCATTGCTGCTGAAGGATTCACCTCATCAAATTCATCTGCAAGTAGAGCAACTGAGATTTCTTCAACCGTTTCTGCACCCAAAACAACAATACAAGTAAGTATGACAGAGAGTGCAACTACAGCAAGGTACCCTTTGAGCTCTGGCCTTACTGAGACAGCTATTTCTAAAGAGATTAGCAGTTCAAGTGCCGAAGCTAAATCCGTTACACTGGCTCTAGCCAATGCTGATTCTGATATTGTTTATGCTCCATCACCACCTCTTCCCATGAGTCCGAGGTTATCTAGGAAACTCTCTGATTTTAGGAGTCCACCACCTAACTTTGAGTCAGGTCCTGCACTAGGTGATCACAGTGGAGACCAGCCTGTTAACGAATATTCAGTTGATAGGCAAATGGATGGAATTCCTAGGAACTTGTCTGATGTACCACCATTGGACAATGATTTGAAGAATGATGATAAGAAAGTCACACAGGATGACATATCAAGTGTACTTAATACTGATATTGTGTTCAAGCAACCAACTCATCTGGTTACACCATCTGAGATCATAAAAGCAGGCTCCTCCTCAGAAACCAATATAATTGATAGCAGGAGTGAGGGAGAGGCAAAATTCCACGATGTGGTTGTCAACAGTGACACAGGTAATGCTGAAGTGGAAGTGAAAGTGGTGGGTGAGGctaaatctaatcaaaatgaCGAATTTGGCCTTCAGGGACAACAGCAACCTGTGGTTTCTGATggtaaagaaaaattcttttgttctCAGGCTTCAGATCTTGGTATTGAGATGGCCCGAGAATGTTGTGCAATATCAGAAGAAACTTACATTACAGAGGAACCTAGGCGAGTTGATTCTGGTGTAGTGGAGTCTCTGGCCCAACCTCCTGGTGACGATCTACTCCAAGACCTTGCAAAAGATGTCCATGAAAAGGTTTCTGAGTCATCTACATCCACAGCTATACCACAGTCACCTGCACCTGGTGCAAAAGGGAAGAGGCAGAAGGGAAAAAATTCTCAAGCAGCAGCTCCGTCTTCCCCATCTCCAAGTGCTAGTAATGTAACTGATTCATCCAATGAACCAGGTGGTTCTTCAAGCCTCCCCTCTGGTGAAAGTGCTTTTCCTCAACTTCTGGCAATGCAAGAGACGCTTAATCAGTTGATGACgatgcaaaaagaaatgcagAAGCAGATGACAATGATGGTTACAGTTCCAGTTACAAAAGAAGGTAGAAGGCTTGAGGCAGCTCTTGGGCGAAGCATGGAAAAAGCTGTCAAGTCTAACAGTGATGCGTTGTGGGCTCGAATTCAGGAGGAGAATGCGAAAAGTGAAAAGTTGTTACGAGACCGTATCCAGCAAATAACAAGTTTGATTAGCAACTTCATGAATAAGGATCTACCGGCCATATTGGAGAGAACAGTGAAGAAGGAGATAGCTGCAGTTGGACCAGCTGTAGTCCGGGCTATAACTCCTGCCATCGAGAAAACAATATCTTCAGCCATTATGGAGTCCTTCCAGAGAGGAGTAGGTGATAAGGCGGTGAATCAACTTGATAAATCAGTTAATTCAAAACTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTCCAGACGACTGGGAAACAGGTGCTTCAGGATGCTCTCAAATCAAGTTTTGAAACATCATTGGTTCCTGCTTTTGAGATGTCATGCAAAGCCATGTTTGAGCAAATAGATAGTACATTTCAGAAAGGCATGGTTGAGCATACGACTTCAGTGCAGCAGCACCTTGAATCTGGGCATACTTCATTGGCAATGACTCTAAGgGATGCTATTAATTCAGCATCGTCCTTCACTCAAACCTTGAGTAGAGAATTGGTTGAGGGCCAACGAAAGCTTTTAGCACTTGCAGCAGCAGGAGCGAACTCTGGTGCAATGAATCCTTTACCTTCCCAGCTGAGCAATGGTCCTTTACTACATGAAAAGGTTGAGGTGCCACTGGATCCGACAAAGGAGCTAACTAGGCTGATATCTGAACGAAAATACGAGGAGGCTTTCACTGCAGCTCTACAAAGAAGTGACGTATCCATTGTATCATGGTTATGTTCTCAGGTTGATCTCCATGGGATTTTGGCAATGGTTCCTCTCCCTTTGAGCCAAGGAGTAGTGCTTTCACTTCTACAGCAGTTGGCTTGTGATATCAACAACGATCCATCTAGGAAACTTGCTTGGATGACCGATGTCGCTGCAGCCATAAATCCTGCAGACCCAATGATCACAATGCATGTGCGGCCCATCTTCGAGCAAGTCTATCAGATACTGAATCATCAACGCAGCTTGCCTACAATGTCTGGACCCGAGCTCTCAAGTATACGTCTTCTATTGCATGTTATCAACTCAATGCTGATGACAtgtaaatg 4232 0.4447 MASPGNPNQPPAPFDMHKFFKPTNPPSSPSSQNPSPFPPSSSFLPSAPPPSSASYPPPSGPYSYPPQTTPFHHQFAQHHVPYSQDQLHPNLHHQRSISFPTPPLQPQPMPPPSAPTNPNAGARLMALLSAPASSELPPQPSAPLHSIHPPSSGVPEFVVPGNLPAMPTMAMLNPGMASPGPIRMPSSKLPKGRHLVGDHVVYDVDVRLPGEVQPQLEVTPITKYGSDPQLVLGRQIAVNKSYICYGLKQGNIRVLNINTALRSLLRGHTQRVTDLAFFAEDVHLLASVGIDGRVYVWKISEGPDEEDKAQITGSIVVAIQIVGEEEAANPRICWHCHKQEVLVVGIGKRILRIDTTKVGNGEAYVAEEPIRCPVDKLIDGVQLVGKHDREVTDLSMCQWMTNRLVSASLDGTIKIWEDRKAQPLVVLRPHDGQPVYSSTFFIAPHRPDHIVLITGGPLNREVKVWASASEEGWLLPSDAESWKCTQTLDLKSSAEPHVEDAFFNQVAALSQAGLLLLANAKRNAIYAVHLEYGPNPAVTQMDYIAEFTVTMPILSFTGTSDILPHGDHIVQVYCVQTQAIQQYALDLAQCLPPPLENVGLEKSDSCVSRDAIAAEGFTSSNSSASRATEISSTVSAPKTTIQVSMTESATTARYPLSSGLTETAISKEISSSSAEAKSVTLALANADSDIVYAPSPPLPMSPRLSRKLSDFRSPPPNFESGPALGDHSGDQPVNEYSVDRQMDGIPRNLSDVPPLDNDLKNDDKKVTQDDISSVLNTDIVFKQPTHLVTPSEIIKAGSSSETNIIDSRSEGEAKFHDVVVNSDTGNAEVEVKVVGEAKSNQNDEFGLQGQQQPVVSDGKEKFFCSQASDLGIEMARECCAISEETYITEEPRRVDSGVVESLAQPPGDDLLQDLAKDVHEKVSESSTSTAIPQSPAPGAKGKRQKGKNSQAAAPSSPSPSASNVTDSSNEPGGSSSLPSGESAFPQLLAMQETLNQLMTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRSMEKAVKSNSDALWARIQEENAKSEKLLRDRIQQITSLISNFMNKDLPAILERTVKKEIAAVGPAVVRAITPAIEKTISSAIMESFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTGKQVLQDALKSSFETSLVPAFEMSCKAMFEQIDSTFQKGMVEHTTSVQQHLESGHTSLAMTLRDAINSASSFTQTLSRELVEGQRKLLALAAAGANSGAMNPLPSQLSNGPLLHEKVEVPLDPTKELTRLISERKYEEAFTAALQRSDVSIVSWLCSQVDLHGILAMVPLPLSQGVVLSLLQQLACDINNDPSRKLAWMTDVAAAINPADPMITMHVRPIFEQVYQILNHQRSLPTMSGPELSSIRLLLHVINSMLMTCK 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02569 1410 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 307 IPR001680 GO:0005515
Bva12g02569 1410 MobiDBLite consensus disorder prediction 918 981 - -
Bva12g02569 1410 SUPERFAMILY WD40 repeat-like 234 510 IPR036322 GO:0005515
Bva12g02569 1410 MobiDBLite consensus disorder prediction 27 65 - -
Bva12g02569 1410 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 1 1410 - -
Bva12g02569 1410 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1410 IPR045152 GO:0031087
Bva12g02569 1410 MobiDBLite consensus disorder prediction 694 730 - -
Bva12g02569 1410 SMART WD40_4 380 417 IPR001680 GO:0005515
Bva12g02569 1410 SMART WD40_4 258 298 IPR001680 GO:0005515
Bva12g02569 1410 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 217 530 IPR032401 -
Bva12g02569 1410 Gene3D - 215 524 IPR015943 GO:0005515
Bva12g02569 1410 ProSiteProfiles Trp-Asp (WD) repeats profile. 384 426 IPR001680 GO:0005515
Bva12g02569 1410 Gene3D - 1322 1409 IPR044938 -
Bva12g02569 1410 MobiDBLite consensus disorder prediction 93 119 - -
Bva12g02569 1410 MobiDBLite consensus disorder prediction 1 71 - -
Bva12g02569 1410 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 265 302 - -
Bva12g02569 1410 MobiDBLite consensus disorder prediction 101 117 - -
Bva12g02569 1410 MobiDBLite consensus disorder prediction 948 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02569 Bva-Chr12 19122458 19129788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02569 K12616 - gmx:100798228 1858.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02569 12 19122458 19129788 Bva12g02569 12 19122458 19129788 ECH