Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02566 ATGTTCCGGAGCCGGATATGGTCAGTTTTGAGGAGCAGCAGAGATGGTAGCATATATAAACTGAGAGGCTCCAGGCCTTCCACTTGTCCTGCCGAAGAATCATTCAGATTTTTTACCCCAGCCACCGTTAGGCATTGCTATCATGTTGTTCGATCGCTTCCTAAGGGTTATCATGGGCCACACATGAGGGGCTTCTGTAGCATGGCATCTGCAGGGACAGATCATAAAGAGGGGTTAAAGCTACTCGTAGCTGGGGGAACTCATGCTAGGAAAGCTGTCGGAATATGGCTTTTTGGCTCTGCTGCGTGGGTGTTTAGTATGGTTGTACTTGGGGGTGTTACAAGACTTACAAGATCTGGTCTTTCCATGACTGATTGGAAATTCACTGGTGGTCTCCCTCCATTGTCAGATGAGGAATGGTTGCAAGAGTTTGAGAAATATAAGCAGTCGCCTGAATACAAGTGTGTTAATAAAGGGatgaaaatagaagattttaaatttatatattggaTGGAATATGCACATCGTATGTGGGGAAGGGCATTAGGAGTGATGTTTGCTTTGCCCTTTTCATACTTTCTCCGTAAGGGCTACATTACCTTAAGATTGGGACTGAGACTCTCTGGTCTATTTGCCCTTGGTGCTGGTCAGGGTCTCGTTGGCTGGTGGATGGTTAAAAGCGGTTTAGAAgAACCAGAATCCGAATATTCTCAGCCACGAGTTAGCCCTTATCGCCTTGCAGTTCATCTTACTTCAGCATTTGCTATTTACTGTGGCCTCTTTTGGACTGCTCTTTCTGTTGTTATGCCTGAACCACCAGCTGAATCAGTAGCATGGGTTCGCGGGGCTGCTAAAGTAAAGAGACTTGCCCTACCTATAAGCTTGCTTGTTGGTCTAACTGCTGTCTCTGGTGCATTCGTTGCAGGAAATGATGCTGGGCGTGCATTCAACACATTCCCAAAGATGGGTGATGTGTGGATACCAGATGATATTTTTGATATGAAGCCTGTCATTCgaaatttatttgagaataCATCGACTGTACAGCTCGATCATCGTATCTTTGCCACTGCAACTCTGATTTCAATAGGCCTATTGTGGTGGTCAACAAGAAAGCTGGACGTACATCCTGCAGTTCGATCTTTGATTGGAACCACAGTTGGTATGGCAGCTCTTCAgGTTACTTTAGGGGTTTCAACTCTTCTTTCATATGTGCCTGTTTCACTCGGCACTGCGCATCAGGCTGGAGCCTTAACTCTTCTAACGCTTATGCTACTGCTCAATCACACCGTTCGAAAGCCCTCATTGGCCCTTCTGAAATCTCTGCCTCAAGTTGTGAAGTCATA 1346 0.4465 MFRSRIWSVLRSSRDGSIYKLRGSRPSTCPAEESFRFFTPATVRHCYHVVRSLPKGYHGPHMRGFCSMASAGTDHKEGLKLLVAGGTHARKAVGIWLFGSAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGGLPPLSDEEWLQEFEKYKQSPEYKCVNKGMKIEDFKFIYWMEYAHRMWGRALGVMFALPFSYFLRKGYITLRLGLRLSGLFALGAGQGLVGWWMVKSGLEEPESEYSQPRVSPYRLAVHLTSAFAIYCGLFWTALSVVMPEPPAESVAWVRGAAKVKRLALPISLLVGLTAVSGAFVAGNDAGRAFNTFPKMGDVWIPDDIFDMKPVIRNLFENTSTVQLDHRIFATATLISIGLLWWSTRKLDVHPAVRSLIGTTVGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTLMLLLNHTVRKPSLALLKSLPQVVKS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02566 448 Pfam Cytochrome oxidase assembly protein 95 424 IPR003780 GO:0006784|GO:0016021|GO:0016653
Bva12g02566 448 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 72 447 IPR023754 GO:0006784|GO:0016020|GO:0016653
Bva12g02566 448 Hamap Heme A synthase [ctaA]. 90 434 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02566 Bva-Chr12 19106730 19111119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02566 K02259 - gmx:100786107 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02566 12 19106730 19111119 Bva12g02566 12 19106730 19111119 ECH