Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02563 ATGGCAGTGCAACATTCTCTCCAAATAACAAAAGGTTCTGGTGcttatgatgatgatgggCATGCCAAAAGGActgGAACCTTGAGAAGTGCTGTTGCTCACATCATCACTGCTGTTATCGGCTCTGGGGTGTTGTCTCTAGCATGGAGTACTGCACAGTTAGGATGGATTGCAGGGCCAGTTTCTTTGCTTTTGTGTGCAATTGTCAcctatatttcttctttcctaCTTTCGGATTGTTACAGAACTCCAGATCCTGTAACTGGGAAAAGAAACTACTCATATACGGATGCTGTTAGAACATACCTTGGTTATAAAAGAACATTCGTTGCTGGTTTCCTTCAATATTTGCTCTTGTATGGGACAAGTACTGCTTATGTTATTACCACAGCAACCTGTCTAAGAGCAATTCTGAAATCAAACTGCTATCACAAGGAAGGCCATAAAGCTCCTTGTAATTATGGGGATACCTTGTATATGATGCTATTTGGACTTGTTCAGATCTTCATGTCATTCATACCAGATCTCCACAACATGGCATGGGTTTCAGTTGCTGCAGCAATTATGTCCTTcacatattcttttattggaCTAGGACTAGGCATTGCACAAGTAGTAGAAAATGGGACAATAAAGGGGAGCGTAGCAGGAGTTTCTGCTGGTACTATCGCTGACAAATTCTGGTTAGTCTTCCAAGCACTTGGTGACATTGCCTTTTCCTATCCGTACTCAGTTATTCTTCTGGAGATACAGGATACACTGGAGTCACCTCCACCAGAAAACCAGACCATGAAGAAGGCCTCCAGGATTGCAATCTTCATTACAACATTCTTCTATCTCTGCTGTGGATGCTTCGGATATGCTGCTTTCGGAGATGCTACACCAGGAAACCTTTTGACAGGGTTTGGGTTTTATGAGCCTTACTGGCTCATTGACTTTGCTAATGTCTGCATTATTCTTCATTTAGTAGGAGGATATCAGATTTACAGTCAGCCAATATATAGTTTTGCTGATAGATGGTGTTCAAGGAAATTCCCCAACAGTGACTTTGTGAACAGATTCTACACCTTGAAACTGCCATTGTTGCCTGGTTTCCAATTGAATCTTTTCAGGCTATGCTTCCGAACTGCCTATGTGATTTCAACCACTGGAATTGCCATCCTGTTTCCTTACTTCAACCAAGTTCTAGGAGTGTTAGGTGCCTTAAACTTTTGGCCACTGGCCATATATTTCCCAGTAGAGATGTACTTTGTGCAGAAGAATATTCAAGCATGGACTAGAAAATGGATTGTTTTTAGAACCTTTAGCTTCGTTTGCTTTCTTGTGACAGTAGTGGGCCTCGTCGGTTCACTTGAAGGGATCATAAGTGCAAAACTTAGCTG 1382 0.4038 MAVQHSLQITKGSGAYDDDGHAKRTGTLRSAVAHIITAVIGSGVLSLAWSTAQLGWIAGPVSLLLCAIVTYISSFLLSDCYRTPDPVTGKRNYSYTDAVRTYLGYKRTFVAGFLQYLLLYGTSTAYVITTATCLRAILKSNCYHKEGHKAPCNYGDTLYMMLFGLVQIFMSFIPDLHNMAWVSVAAAIMSFTYSFIGLGLGIAQVVENGTIKGSVAGVSAGTIADKFWLVFQALGDIAFSYPYSVILLEIQDTLESPPPENQTMKKASRIAIFITTFFYLCCGCFGYAAFGDATPGNLLTGFGFYEPYWLIDFANVCIILHLVGGYQIYSQPIYSFADRWCSRKFPNSDFVNRFYTLKLPLLPGFQLNLFRLCFRTAYVISTTGIAILFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKNIQAWTRKWIVFRTFSFVCFLVTVVGLVGSLEGIISAKLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02563 460 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
Bva12g02563 460 Gene3D Amino acid/polyamine transporter I 21 457 - -
Bva12g02563 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 459 - -
Bva12g02563 460 PANTHER OS05G0424000 PROTEIN-RELATED 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02563 Bva-Chr12 19095056 19100048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02563 16 455 Organic Solute Cotransporters AT5G09220 53.273 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02563 K24917 - gmx:100786621 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02563 12 19095056 19100048 Bva12g02563 12 19095056 19100048 ECH