Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02560 ATGCATCTCTACAATGCATGGCTGCCGCCACCAGTGGCGGCACAAACAGCCAAAGAGCGGGAGTCGTTCGCGCGCGTTATCAGCTCCGTCAAGGACTCGTATCGGCTAGATGATCCTGAATCCGTGTATTCAACTCTCAAATGGATTTCGGTTCTGGACCTTTTCTTAAAGGCAAAAAGTGAAGTATCATTGGAAGATGTTCATGCCCTTATTGAGATGGGACTAGAATTGTTTCATATAGCACGTAACAAGCTATACGCCCAGGTTAGATGGGGAAATTTATTAGTAAGACTACTGAACAAGTATAGGAAAAAGATTGCTCTGACTGTTGAGTGGCGGCCCTTGTATGATACTCTGGTTCTCACACATTTCACTAGAAATACAGGTCCAGAAGGTTGGAGATTAAAGCAGCGCCATTTTGAAGCTATAACTTCTCTTGTACGGTCCTGTCGGAGGTTCTTTCGATCAGGTTCTGCCATTGAGATATGGTCTGAGTTTAAATCTTTACTGCAAAACCCATGGCATAATTCATCCTTTGAAGGTTCTGGATTTGTGAGATTGTTTCTCCCAACGAACTTGGACAACCAGACCTTCTTTTCACATGATTGGATAAAAGAGTGTATAGACTTATGGGACTCTATACCCAATTGCCAATTCTGGAACAACCAATGGGCAGCTGTTATAGCTCGtgtcataaaaaattacaacaatgTTGACTGGGAGTGCTTCTTGCCAACACTTTTTGCtagatatttaaatatgtttgagGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTTTTCACTGGATGTCCCCAGAAACACAAGATTCTTGTTCTCCAATAAATCTGCCACCCCAGCAAAGGCCATTGCCAAATCAATTGTATATCTATTAAAACCTGGAAGTTCTTCACAGCAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGATGGACTTACTCATTGGAGAGATTTTTGTTCCACTTAGTGATTCAATTCCAGAAGCGTCTACAGCATGAACAACAGTGCACAAATAATAGCAGAAAAGATGAACATCTTGGGGGACCAGAGAGGGCttcatttgttaatttaatgcTGAAATTAATTGATCGTGGTCAATACAGCAAGAATGAACATCTATCTGAAACCGTTGCTGCAGCAACTTCTATATTGTCCTATGTAGAACCTTCATTGGTTCTGCCATTTGTGGCATCTCGGTTCCGTATGGCCCTGGAGACGATGACTGCCACCCACCAATTGAAAATTGCTGTCATGTCAGTGGCATTTGTTGGGCGTTCACTGTTTCTTACATCTGTATCAGCTTCCTCCATGAAACCAATTGATCTTGGTGGTGGTGATGATGCTTTGGTTGACCTTGTGGTGGTTTCATTGTCCAATGCATTGCTTGGCATGGATGCTAATGATCCTCCTAAAACCTTGGCTACTATGCAATTAATTGGTTCCATTTTTTCCAATCTGGCTTTATTGgatgataaaattgatgatttatcatttatgCCTATGATTCGCTTTTCCGAATGGCTGGATGAGTTCTTATGCCGTCTATTTTCCTTACTTCTACACTTGGAACCCAGCAGCGTTATAAATGAGGGCATACACTCAGCAGCAGCATCAGGAACTTTTCTGGTTGATGATGGGCCATACTACTTTTGTATGCTTGAAATCCTGCTTGGGAGACTTTCAAAATCACTGTATAATCAGgctttgaagaaaatttcaaaatttgtgagAACAAATATTCTTCCTGGTGCTATTGCAGAGGTGGGATTGCTTTGTTGTGCATGTGTTCACTCAAACCCAGAAGAGGCAGTTAGCCAACTTATTGAGCCAATATTGTTGTCGGTAATATCCTCCTTGAAAGGAATACCACGCACTGGGTTTGGAGGAGGGGGAACTTTTGATGTTTCAGCTTCAACCAAGgtTAGATCCACACTGTCACCAGCTCTTGAGTCTGCAATTGACTATCAATTAAAGATACTATCAGTTGGCATCACATATGGAGGCCCAGCACTCCTTCGGTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCTCCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTTCGATCCCTTATTGGGAGTCAAATTCATTATTATCCAATTGATCAGTATAGGTGCTTTTTGAATCACCCTGATGCTGCTGCTCTAGAAGAATggattagctccaaagattactcCAATGATGAAAGATTGATCCCAAAGTGGCATATTCCTTGTGATAAGGAAGTTCAGTTTGCAAATGAGCTGTTAGACATTCATTTTAAGTCTGCTTTGGATGACCTCTTGAACatatgtcaaaataaaatccatgCTGATCAGGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGTATTGAATCATCATTGCAAGGTCTTTTTTCTTGCATACCTGATTTCCTCCCAGCCTCAAAGAATGGGATGGTTGAAGGTTTAGACCATACCTCCTTTTTGATTGCTGGAGCAACAGGTTCTACTGTTGGTAGTACTGCTCTGCGAGAAAAGGCTACTGAGATTGTACATGAAGCCTGCAAATATGTACTGGAGAAGAAATCAGATGACAGTATACTGTTGATACTCATCATTCGTATTATGGATGCTTTAGGAAACTATGGAAGTATGGAATATGATGAGTGGTCTAGTCACAGGCAGGCTTGGAAGTTGGAATCCGCTGCCATAATAGAGCctccaattaattttattgtatcCTCTCATtccaaaggaaagaaaagACCAAGGTGGGCACTTATTGACAAGGCATTCATGCACAATACGTGGAGATCTTCACAAGCCTCCTATCATCTATACCGTATAAGTGGGAATTTCTCTCCATCAGATCATGTGATTCTTTTGGTGGATGATCTgttaaatctctctttgcaTAGCTATGAAACTGTCCGCATGCTTGCTGGAAAAGCTCTAACGAAGATAATCAAGAGATGGCCGTCTATGATTTCAAAGTGTGTTATCACTTTTACAAACAACTTGCTGGACCCCAACGCAGAAGAATACGCTGTACTAGGCTCCTGTTCAGTTCTTGCCTCACAAACAGTTCTCAAGCATTTGACAACGGATCAAAAGTCATTCTCTTCATTTATCATTGGGATTCTTTCCAGtTCTCATCATGAATCCCTGAAAGCCCAGAAAGCAATTAATGAGCTTTTTGTGAAATACAACATCTACTTTTCTGGAGTATCTAGAAGCTATTTCAGGATATCAGACAATCATAATAGTGGACCAGATTTTTCAGAGTTGGTTTCTCAGATAGGCTCCATGAGTTTTGATTCTACAGGGCTGCATTGGCGGTATAATTTGATGGCCAACAGAGTCCTGCTTTTGTTGGCTTTGGCTTCTAGGAACCACCCAAATTTATCTTCTAAAATCTTAAGTGAAACTGCTGGACActttttgaagaatttaaaaagTCAGCTTCCTCAGACAAGAATACTTGCAATTTCTGCTCTAAATACATTATTAAACGAATCGCCTTATAAGCTGTCTGCTGAGGAGCAATCTGTCATAAAAGAGGATTTGCAAGGCAATGCCAAGTCATCCCTTGAGGGAGCTTTAACTCAAGCTTTCCAAGAAGAGGGTTTCTTTAATGAGACATTGAATAGTCTCTCTCATGTTCACATAATAACAGACACTGACACTGCATCAAGAGGGAATCAAGGTGATTCCAGTTTCCAGAGCTTAGCAGACAAATCGATCACCCGcttctattttgaattttcagcTTCATGGCCACGTACTCCAAGTTGGATATCGTTTTTAGGAAGTGATAGCTTCTATTCAAATTTTGCTCGAATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCCGTAGTATTGGCTCTTAAAAGTGCACTAGATGAGTTTACAATTGCCAAGGAGCGGTCTAAACAGTGTGTAGCTGCAGAAGCATTGGCAGGTGTGTTACATTCTGATGTTGATGGTCTTTTAAAATCATGGGAAAGCTGGCTGATGCCCCAGTTGAAGAATATTATTCTGGCACAATCTGTGGAGTCAATGCCTGAGTGGGCATCTTGCATAAGATATGCAGTTACTGGTAAAGGGAAGTATGGAACAAGAGTTCCTCTTTTGAGGCAGCAAATTCTAGATTCTTTGATGGAACCTCTGCCTCCAACAGTTGCTACCACTGTAACAGCCAAGCGTTATGCTTTTCTGGCAGCTGCACTAATAGAAATATCCCCACAAAACATGCCAATAACTGAAATTCAGCTCCATGGTATGCTTTTGAAAGAACTGCTTGGTAATATGTCTCACTCATCTGCTCAAGTGAGGGAAGCCCTTGGTGTTATCCTTTCCATATTGTGTTCTAACATTCGACTATATCGGTTGAACCATCATGATAATTCATATGATGGGAGAATCAACGGCGTTGGTGATTTATTGAATGATGAAAGCTGGGTCCAGTTTCTTACAGATCGAGCAGCTGAAGCAGTTGTGAATATTCAGAATTCTGCCCAGTCTGACAAAGTTGTCAATCCCATGGATACAAGTCCACAAAATGGGCATCTGAATGGTGTTTCGGAAGATGATGTGAAATGGATGGAAACGCTACTCTACTTCGTCATCTCATCGTTGAAGTCTGGGAGATCTTCATACCTGCTGGATGTGATTGTTGGGCTTCTGCATCCAGTGATTTCCTTGCAGgaAACATCAAATAAGGACTTGTCAACATTAGCCAAGGCAGCATTTGAATTGCTAAAATGGAGGATACTCTGGGAACCTCATCTCCAGAAGGCTGTTTCAGTGATTCTTTCTGCTGCCAATGATTCCAACTGGCGAACCAGATCTGCTACATTGACATATTTGCGTACTTTCATGTACAGGCACACTTTCATCCTCCCAAGtttgaagaagcaagaaatttGGAGAACCGTTGAGAAGTTGCTTGTAGACAACCAAGTTGAGGTGAGAGAGCATGCTGCAGCAGTTTTAGCAGGCTTAATGAAGGGTGGGGATGAAGATCTAGCTAAAGACTTCCGTGATAGAGCTTATGCAGAAGCAAATATTCttcaaaagagaagaaagatcagAAATGCAAGATCTGGCTTGTCTGTGGCTTCTGTTCATGGTGCTGTACTAGCTTTGGTGGCTTCTGTATTATCAGCCCCATATGATATGCCCAGTTGGTTGCCTGAGCATGTTACACTACTAGCTCGTTTTAGTGGGGAGCCATCCCCTGTGAAATCTACAGTTACAAAAGCAGTTGCAGAGTTCCGGCGGACCCATGCAGATACATGGAATGTTCAGAAAGAGTTATTTACAGAAGAGCAACTCGAGATTCTAGCGGATACatcctcttcatcatcataTTTTGCTTG 5444 0.3981 MHLYNAWLPPPVAAQTAKERESFARVISSVKDSYRLDDPESVYSTLKWISVLDLFLKAKSEVSLEDVHALIEMGLELFHIARNKLYAQVRWGNLLVRLLNKYRKKIALTVEWRPLYDTLVLTHFTRNTGPEGWRLKQRHFEAITSLVRSCRRFFRSGSAIEIWSEFKSLLQNPWHNSSFEGSGFVRLFLPTNLDNQTFFSHDWIKECIDLWDSIPNCQFWNNQWAAVIARVIKNYNNVDWECFLPTLFARYLNMFEVPVANGSGSYPFSLDVPRNTRFLFSNKSATPAKAIAKSIVYLLKPGSSSQQHFEKLVNILEQYYHPSNGGRWTYSLERFLFHLVIQFQKRLQHEQQCTNNSRKDEHLGGPERASFVNLMLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFRMALETMTATHQLKIAVMSVAFVGRSLFLTSVSASSMKPIDLGGGDDALVDLVVVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVINEGIHSAAASGTFLVDDGPYYFCMLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEAVSQLIEPILLSVISSLKGIPRTGFGGGGTFDVSASTKVRSTLSPALESAIDYQLKILSVGITYGGPALLRYKDQFKEAIFLAFDSPSWKVNGAADHLLRSLIGSQIHYYPIDQYRCFLNHPDAAALEEWISSKDYSNDERLIPKWHIPCDKEVQFANELLDIHFKSALDDLLNICQNKIHADQGDEKEHLKVTLLRIESSLQGLFSCIPDFLPASKNGMVEGLDHTSFLIAGATGSTVGSTALREKATEIVHEACKYVLEKKSDDSILLILIIRIMDALGNYGSMEYDEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKKRPRWALIDKAFMHNTWRSSQASYHLYRISGNFSPSDHVILLVDDLLNLSLHSYETVRMLAGKALTKIIKRWPSMISKCVITFTNNLLDPNAEEYAVLGSCSVLASQTVLKHLTTDQKSFSSFIIGILSSSHHESLKAQKAINELFVKYNIYFSGVSRSYFRISDNHNSGPDFSELVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASRNHPNLSSKILSETAGHFLKNLKSQLPQTRILAISALNTLLNESPYKLSAEEQSVIKEDLQGNAKSSLEGALTQAFQEEGFFNETLNSLSHVHIITDTDTASRGNQGDSSFQSLADKSITRFYFEFSASWPRTPSWISFLGSDSFYSNFARIFKRLVQECGMPVVLALKSALDEFTIAKERSKQCVAAEALAGVLHSDVDGLLKSWESWLMPQLKNIILAQSVESMPEWASCIRYAVTGKGKYGTRVPLLRQQILDSLMEPLPPTVATTVTAKRYAFLAAALIEISPQNMPITEIQLHGMLLKELLGNMSHSSAQVREALGVILSILCSNIRLYRLNHHDNSYDGRINGVGDLLNDESWVQFLTDRAAEAVVNIQNSAQSDKVVNPMDTSPQNGHLNGVSEDDVKWMETLLYFVISSLKSGRSSYLLDVIVGLLHPVISLQETSNKDLSTLAKAAFELLKWRILWEPHLQKAVSVILSAANDSNWRTRSATLTYLRTFMYRHTFILPSLKKQEIWRTVEKLLVDNQVEVREHAAAVLAGLMKGGDEDLAKDFRDRAYAEANILQKRRKIRNARSGLSVASVHGAVLALVASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02560 1814 Pfam Domain of unknown function (DUF3437) 1729 1814 IPR021843 -
Bva12g02560 1814 Pfam Proteasome-substrate-size regulator, mid region 519 824 IPR032430 -
Bva12g02560 1814 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Bva12g02560 1814 SUPERFAMILY ARM repeat 962 1696 IPR016024 -
Bva12g02560 1814 Gene3D - 1308 1745 IPR011989 -
Bva12g02560 1814 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1814 - -
Bva12g02560 1814 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1814 IPR035309 GO:0016504|GO:0070577|GO:0070628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02560 K06699 - gmx:100814812 3063.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02560 12 19066143 19086131 Bva12g02560 12 19066143 19086131 ECH