Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02501 ATGGGTCAGAAAAGAGTTCTCCTACTATGCGGTGACTACGTAGAAGATTACGAGGCCATGGTTCCATTTCAAGCATTGCTAGCCTATGGTGTCTCCGTCGACGCCGTTTGCCCGGGAAAGAAAGCTGGTGACACCTGCCGCACCGCTGTCCATCAGAATTCCGGTCATCAGACTTTTTCTGAGACGCCCGGTCACAATTTTGCGCTCAATGCGACGTTTGATGAAATTGAAGCCAAAAACTATGATGGGCTGGTGATACCAGGTGGAAGGGCGCCGGAGTATCTTGCTCATGATCCAAAAGTTGTGGCCTTGGTGACGGAATTTGCCCATTCTGGAAAAATAATTGCTTCCATTTGTCATGGGCAGTTGATTCTGGCAGCTGCAGGCGTATCTAAAGGTCGGAAGTGCACGGCTTTTCCTCCTGTTAAACCTGCACTCATTGCCTCTGGTGCTCATTGGGTTGAACCTGAAACTATGGCATCAACAGTGGTTGATGGCAATCTCATTACTGCAGCCACTTATGAAGGGCACCCAGAGTTCATTGGTCATTTTGTGAAGGCATTAGGTGGTAACATTAGTGGCTCGAATAAAAGGATTCTATTTCTTTGTGGGGATTACATGGAAGATTACGAGGTGACTGTTCCCTTTCAGTCGCTTCAGGCTTTAGGGTGCCATGTTGATGCAATTTGCCCCAAAAAGAAAGCCGGTGAAACCTGTCCAACTGCTATTCATGAGTTTGAGGGTGACCAAACTTACAGTGAGAAGCCAGGGCactgtttttttcttactgCGAACTATGATGATGTTGATGCTTCAAGCTATGATGCTCTTGTCATCCCGGGTGGTCGAGCCCCTGAGTATCTGGCATTGAATGAATCAGTTATTGCCGTGGTGAAGCATTTCTTTGAAAGCAAGAAGCCAGTTGCGTCTATCTGCCATGGACAGCTGATTTTAGCTGCTGCTGATGTTCTCAAGGGAAGGAAATGCACTGCTTACCCAGCCGTGAAGCTTAATGTGGTTCTAGCAGGAGCCACATGGCTGGAACCTGATCCCATAGAACGTTGTTTCACTGATGGGAATCTGGTTACTGGAGCTGCATGGCCCGCGCACCCTGAGTTCGTTTCTCAGTTGATGACACTACTTGGTATTCAAGTATCTTTCTA 1163 0.4712 MGQKRVLLLCGDYVEDYEAMVPFQALLAYGVSVDAVCPGKKAGDTCRTAVHQNSGHQTFSETPGHNFALNATFDEIEAKNYDGLVIPGGRAPEYLAHDPKVVALVTEFAHSGKIIASICHGQLILAAAGVSKGRKCTAFPPVKPALIASGAHWVEPETMASTVVDGNLITAATYEGHPEFIGHFVKALGGNISGSNKRILFLCGDYMEDYEVTVPFQSLQALGCHVDAICPKKKAGETCPTAIHEFEGDQTYSEKPGHCFFLTANYDDVDASSYDALVIPGGRAPEYLALNESVIAVVKHFFESKKPVASICHGQLILAAADVLKGRKCTAYPAVKLNVVLAGATWLEPDPIERCFTDGNLVTGAAWPAHPEFVSQLMTLLGIQVSF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02501 387 PANTHER DJ-1 PROTEIN 14 387 IPR006286 -
Bva12g02501 387 CDD GATase1_PfpI_1 198 381 - -
Bva12g02501 387 ProSiteProfiles PfpI endopeptidase domain profile. 4 189 IPR006286 -
Bva12g02501 387 SUPERFAMILY Class I glutamine amidotransferase-like 196 381 IPR029062 -
Bva12g02501 387 SUPERFAMILY Class I glutamine amidotransferase-like 3 190 IPR029062 -
Bva12g02501 387 ProSiteProfiles PfpI endopeptidase domain profile. 197 382 IPR006286 -
Bva12g02501 387 PANTHER DJ-1/THIJ/PFPI FAMILY PROTEIN 14 387 - -
Bva12g02501 387 CDD GATase1_PfpI_1 5 188 - -
Bva12g02501 387 TIGRFAM PfpI: intracellular protease, PfpI family 6 188 IPR006286 -
Bva12g02501 387 TIGRFAM PfpI: intracellular protease, PfpI family 199 381 IPR006286 -
Bva12g02501 387 Gene3D - 2 194 IPR029062 -
Bva12g02501 387 Gene3D - 195 387 IPR029062 -
Bva12g02501 387 Pfam DJ-1/PfpI family 4 186 IPR002818 -
Bva12g02501 387 Pfam DJ-1/PfpI family 197 379 IPR002818 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02501 Bva-Chr12 18753430 18756143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02501 K18881 - jre:108988092 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02501 12 18753430 18756143 Bva12g02501 12 18753430 18756143 ECH