Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02309 ATGGAGAACGAGAAAGATTTCATGGTGCATGATATTCTGCTGCAAATTGGTCTGATCCTTCTGATGGTAGTCATGTTCCTGTTTATGCACGATATTCCCAAGAAGCTCTATGCCAAGCTCCGCCTCAGAAACAGAGCCAATATTCAAGCCAAACGCCACTTCGTGCAAGGCGCTCAGCTCCTCGCTCGAGCTAGATCCTCTGAGACTCGCTCCAGCGCCAATTCATTGGCCAAGGAAGCCGAAGCCGAAGCCGAAAAAGCTATCGCTCTTGATCCGAAGGATGCGGCTGCTTACCTTCTCAAAGCCATGGCTCTTGATCTCCAAGGGTTCAGGACATCGGCTCTTGACTCGCATGACGTGGCTCTGTCCCCGCTTGCAGTGAAGTCGTTGACCGACAAGGAGAGAGGGGATGCGCTTTTCAAGAGGGCTGAGTTGAAGATGGCGATGAATCCGCGTAGCCAAGTTGACTCGGTCCTTGCGGATTTAGCTGAGACTTTGAAGCTGAATTCGAATAATGCCAAAGCTCACTGTCTCTTGGGGGAGTGCTACGaagcaaagaagatgaaagaggAAGCGAAGAAGGCTTATGAGGATGCTCTCAAAGTAGAGCCGCAATTGGATGCGGCTCGAGAGGCCCTGAACAGGTTGGATTCATA 656 0.497 MENEKDFMVHDILLQIGLILLMVVMFLFMHDIPKKLYAKLRLRNRANIQAKRHFVQGAQLLARARSSETRSSANSLAKEAEAEAEKAIALDPKDAAAYLLKAMALDLQGFRTSALDSHDVALSPLAVKSLTDKERGDALFKRAELKMAMNPRSQVDSVLADLAETLKLNSNNAKAHCLLGECYEAKKMKEEAKKAYEDALKVEPQLDAAREALNRLDS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02309 218 Gene3D Tetratricopeptide repeat domain 154 218 IPR011990 GO:0005515
Bva12g02309 218 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 215 - -
Bva12g02309 218 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Bva12g02309 218 Gene3D Tetratricopeptide repeat domain 73 153 IPR011990 GO:0005515
Bva12g02309 218 SUPERFAMILY TPR-like 85 213 IPR011990 GO:0005515
Bva12g02309 218 PANTHER - 10 215 - -
Bva12g02309 218 Pfam Tetratricopeptide repeat 173 205 IPR019734 GO:0005515
Bva12g02309 218 SMART tpr_5 173 206 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02309 Bva-Chr12 17533983 17535020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02309 - - tcc:18591820 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02309 12 17533983 17535020 Bva12g02309 12 17533983 17535020 ECH