Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02299 ATGCGCGCCTCAGAAACCTTTAATGCGTTTCAGGCTTATCCCACCAAGCCCAAAGAGGCTAAACTGTGGGATGGTCGTTTCGAGGAGAGTGTTACCGATGCCGTTGAGAGGCTCACAGAGTCAATCTTCTTCGATAAAGAGCTTTACAAGCATGATATTTTGGGAAGTAGAGCACATGCTTCAATGCTAGCTCAACAGggATTGATGAGCACCAGTGAGAGGGATTCTATTCTTCAAGGTCTTGATGAAATAGAGAGGCGCATTGAAAATGGCGAGTTCAATTGGAGAACTGACCGCGAGGATGTCCATATGAACATTGAAGCAGCACTTAGTGAAATGATTGGTGAACCTGCAAAGAAGCTACACACAGCTCGGAGTCGTAATGATCAAGTTCTGACTGACTTTCGCCTCTGGTGCCGGGATGCCATTGATAAGATCATCACCTACATTAAACGCCTTCAGGTCTCATTGGTGACTTTGGCATTAAAGAATGACGGACTTATTGTTCCTGGTTACACTCATTTGCAGCGTGCCCAACCAGTTTTATTGTCGCATATTCTACTGGCATATGTTGAAGAGGTCTGCTACTA 590 0.4492 MRASETFNAFQAYPTKPKEAKLWDGRFEESVTDAVERLTESIFFDKELYKHDILGSRAHASMLAQQGLMSTSERDSILQGLDEIERRIENGEFNWRTDREDVHMNIEAALSEMIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDKIITYIKRLQVSLVTLALKNDGLIVPGYTHLQRAQPVLLSHILLAYVEEVCY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02299 196 PANTHER ARGININOSUCCINATE LYASE 18 193 IPR009049 GO:0004056|GO:0042450
Bva12g02299 196 Pfam Lyase 25 193 IPR022761 -
Bva12g02299 196 PRINTS Fumarate lyase superfamily signature 166 184 IPR000362 -
Bva12g02299 196 PRINTS Fumarate lyase superfamily signature 121 139 IPR000362 -
Bva12g02299 196 Gene3D Fumarase/aspartase (Central domain) 124 196 - -
Bva12g02299 196 SUPERFAMILY L-aspartase-like 22 194 IPR008948 GO:0003824
Bva12g02299 196 Gene3D - 19 123 IPR024083 -
Bva12g02299 196 PRINTS Argininosuccinate lyase family signature 120 142 - -
Bva12g02299 196 PRINTS Argininosuccinate lyase family signature 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02299 Bva-Chr12 17483482 17484370 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02299 K01755 - gmx:100796544 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02299 12 17483482 17484370 Bva12g02299 12 17483482 17484370 ECH