Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02296 ATGGAGAACGCAGATTCAACGCAATGTGTGCGAGTCGCCGTCAACATCCGCCCTCTGATTACATCGGAGCTTCTACTCGGCTGTACAGATTGCATTTCCGTTGTTCCAGGCGAACCTCAGGTGCAAATTGGGTCACATTCCTTCACATATGATTATGTTTATGGTAGTAGGGGGTCACCTCCTTCTGCAATATATGATGATTGTGTAGCTCCCCTTGTTGATGCGCTTTTCCATGGCTACAATGCCACTGTTCTTGCATATGGCCAGACGGGCTCTGGAAAAACATATACAATGGGGACCAACTATACAGGAGAAGGAAGCAGTGGTGGAATTATACCCAGGGTGATGGAATCTATATTTAAGAGAGTTGAAACCATGAAAGACTCTACAGAATTTTTGATAAGAGTGTCATTTATTGAGATATTCAAGGAAGAGGTTTTTGATCTGCTTGATACAAATTCATCAGTTTCATCTAGAGAAGTAGCATCAACTGTAAAGCCTGCTGTGCCACCCAGAGTTCCCATTCAAATCAGAGAAACAGTGAATGGAGGAATAACGCTTGCTGGTGTGACTGAGGCTGAAGTtaagacaaaagaagaaatggcaTCGTATATATCTCGTGGTTCATTGTCACGTGCCACTGGCAGTACAAATATGAACAGCCAATCGAGTCGTTCACATGCTATATTCACAATCACAAtggagcaaaagaaaattgcttgCTGTCGTAATGGGGTTGTTGATAACGATATTGGTGATGACATCTTGTGTGCGAAATTCCATTTAGTGGACCTTGCTGGTTCCGAACGTGCAAAAAGAACGGGTGCTGATGGCATGCGTTTGAAAGAAGgGATTCATATCAACAAGGGTTTGCTGGCTCTTGGGAATGTGATAAGTGCCTTGGGAGATGAGAAAAAGCGAAAAGAAGGAGGTCACATACCATATCGTGATAGCAAATTAACACGCTTGCTGCAGGATTCTCTTGGTGGAAACAGCAAAACAGTCATGATTGCATGTGTTAGTCCTGCTGACACCAATGCTGAAGAGACTTTGAACACTTTAAAGTATGCAAATCGTGCTCGCAACATTCAGAACAAGGCAGTTGTTAATCGTGATCCGATGGCAGCTCAGATGCAGATAATGCGCAGTCAGATTGAACAATTGCAGGCtgagcttttattttatagaggTGATGCCAGTGGACCATTTGAGGAACTTCAGATTcttaaacacaaaatatcCTTACTTGAAGCGAGCAATGCTGAGCTACAACGGGAGCTTCAAGAACGCGAAGTAACTTGTGAGAATTTAACGCGACGTGCTCTTGATGCTCagGTTGAAAAAGATCAATTGGTAATGAAAATTGAATCTGTTCGAAATGGTAAATCTTGGGAAGAGATTGACTCAAATTCAAATCAGGATTATGACTTGGTGAAATCTTATGTGTCAAAAATTCAAGATCTAGAGGTGGAAATGTTGCGCTTGAAAAATTTCAGCAACACAAAACCTACTCGTTTTGTTGATTGGACTGACTTGGACGAGGATGGAGATACTAAAGCTGTTGACATATCagATGCAGATGGCATGGAAGATCATGCGAAGGAGTTAGAACACTCTTCTCTTCAAGAAAAGCTTGATAGGGAGCTAAAAGAATTGGACAAAAAACTCGAACAAAAGGAGGCTGAAATGAAGCGGTTTAATGGTGCTGATACTTCAGTCCTCAGGCAACATTATGAAAAGAAACTTCTGGAAttggaaaaggagaagaaacttTTACTGAAAGAGATTGATGAACTGAAGTGCAATCTTACAAATATATCATCCACCTCTGATGATGGTGCTCAGAAGTTAAAGGAGGATTATCTTCAGAAGTTGAATGCTCTTGAAGCGCAGGTCTCTGagctgaagaagaagcaagatGCTCAGGCTCAGTTATTAagacaaaaacagaaaagtgaTGAGGCTGCGAAGCGACTTCAGGATGAGATCCAAAGAATTAAGACTCAAAAGgtTCAActgcaacaaaaaattaagcaagAATCTGAGCAGTTTAGATTATGGAAAGCTTCACGCGAAAAAGAAGTTCTCCAGCTCAAGAAAGAGGGAAGGAGGAATGAATACGAGATGCATAAGCTGTTAGCCTTGAATCAGAGGCAAAAAATGGTATTGCAAAGGAAGACGGAAGAAGCTTCCTTGGCCACAAAAAGACTAAAAGAACTTTTGGAATCTCGAAAGGCTTCGCGTGAAACCGGCGCTGGAGGTGGAAATGGTCCTGGGATTCAGGCTTTGATGCAGGCAATTGAGCATGAGCTTGAAGTCACTGTCCGGGTGCATGAAGTACGGACAGAATATGAGCGTCAAATCGAAGAGCGTGCTAAGATGGCGAATGAGATAAAGAGGTTAAAGCAGGAAGCAGAGACGATGAATCAGAATAAtacaagTGGTAGCCCCATATCATTGTCGCCCAGTGCAAGAAGTTCAAGAGTTTTTGCCCTTGAAAACATGCTTGCCACttcttcgtcaactttggttTCTATGGCGTCTCAGTTGTCAGAGGCAGAGGAGCGTGAACGGTTTTTCAGTGGCAAGGGACGTTGGAACCAAGTTCGGTCCCTTGCCGATGCCAagaatttgatgaattttttattcaacttaACATCTTCTTCCaggtGCTTATTGCGAGATAAAGAAGTTGCTTGCCGAGAGAAGGACATAGAAATCAGAGatctaaaagagaaaatagtaCGGCTGAGTTGTTCACTACGACAGTCGGAAACGCATAGGACTGAACTTATTCATCAAGTGAAGTTGTTGCAGAATGCAACCTTGAATGCTGGAGGACACAAGTATGACTTGCGCAAGCCGGAAAACCGTCGATCTACTATGTTATTCGAAGATATGATTATAGCTGACACAGACACAGATGGTGATGACTCTGTTGCGGAGGCAACAGATGATGAGTGGGTTGAATCGGCTAAATTACAGGTTAAGAACAGGAACTCCAAAAGCGGTCGTTCAAGCATGGAAAAGAATCCATCTAATAGCAACAATTCTGAAGACGTCAAAGATGATTCAGGGGAAGGTGGATCAGATGTTTGTTGTTCTTGCAGTAGGTCGTCTTCATGCAAGACGAATAAATGTCAGTGTAGAGTTGCAGGCAATGATTGTGGAGCATCTTGTGGATGTTTGGCCACCAAGTGTGCCAACAGAGGATCTGTTCCAGATGACCTGCAACAATCGGAAGCAGCGGAAGGGAATGAAAGCGGTTTCAATACTGAAGAAACTGACAAAGATCGCCTTCTTACAACTGAAGGTGCTGTGCTACTTCAGAGTGCACTAGCTGAGAAGCCCGTTGAGACCAATAGTGAACGTGGGCCAAGAAAACCTCTCTCTGACATAGGAAATACACTGGCGAAATCAACTGCCCCGAAGCCTAATCACAGAAAGAAATGGCGGAAATCCACAATCCTTCTGGTTTCAAACCCGCCACCTCTCTCACAGTCAGAGAATTCTGAAGTCCCCaggaaacaaaataatggCACAAGTGAAGCAAATATCCCCGTGAAGCCAGCTCAAATTAGGCCATCAAGGCCTGAAAATGCTGCAGTGGCACCGAAGGTAGAGGGCTTTTCATTTGACCCAGAAGATATTCCTTTGAAATTACCACGTGTTATGCGAAAGGCAGCGTCATCGAATGCTGTCGTCCCATTCTGGGATAGGAATTCTAGTAAGCCAGATGAATCTGTCGTAAAAACGGAGTCAGATGTTATCGACACTAGAAGTCCAGTTCGGCAGAAAAGAACATTtgaggagaaagaaaacagtGGTCGTTA 3833 0.4073 MENADSTQCVRVAVNIRPLITSELLLGCTDCISVVPGEPQVQIGSHSFTYDYVYGSRGSPPSAIYDDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEGSSGGIIPRVMESIFKRVETMKDSTEFLIRVSFIEIFKEEVFDLLDTNSSVSSREVASTVKPAVPPRVPIQIRETVNGGITLAGVTEAEVKTKEEMASYISRGSLSRATGSTNMNSQSSRSHAIFTITMEQKKIACCRNGVVDNDIGDDILCAKFHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDEKKRKEGGHIPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAVVNRDPMAAQMQIMRSQIEQLQAELLFYRGDASGPFEELQILKHKISLLEASNAELQRELQEREVTCENLTRRALDAQVEKDQLVMKIESVRNGKSWEEIDSNSNQDYDLVKSYVSKIQDLEVEMLRLKNFSNTKPTRFVDWTDLDEDGDTKAVDISDADGMEDHAKELEHSSLQEKLDRELKELDKKLEQKEAEMKRFNGADTSVLRQHYEKKLLELEKEKKLLLKEIDELKCNLTNISSTSDDGAQKLKEDYLQKLNALEAQVSELKKKQDAQAQLLRQKQKSDEAAKRLQDEIQRIKTQKVQLQQKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASLATKRLKELLESRKASRETGAGGGNGPGIQALMQAIEHELEVTVRVHEVRTEYERQIEERAKMANEIKRLKQEAETMNQNNTSGSPISLSPSARSSRVFALENMLATSSSTLVSMASQLSEAEERERFFSGKGRWNQVRSLADAKNLMNFLFNLTSSSRCLLRDKEVACREKDIEIRDLKEKIVRLSCSLRQSETHRTELIHQVKLLQNATLNAGGHKYDLRKPENRRSTMLFEDMIIADTDTDGDDSVAEATDDEWVESAKLQVKNRNSKSGRSSMEKNPSNSNNSEDVKDDSGEGGSDVCCSCSRSSSCKTNKCQCRVAGNDCGASCGCLATKCANRGSVPDDLQQSEAAEGNESGFNTEETDKDRLLTTEGAVLLQSALAEKPVETNSERGPRKPLSDIGNTLAKSTAPKPNHRKKWRKSTILLVSNPPPLSQSENSEVPRKQNNGTSEANIPVKPAQIRPSRPENAAVAPKVEGFSFDPEDIPLKLPRVMRKAASSNAVVPFWDRNSSKPDESVVKTESDVIDTRSPVRQKRTFEEKENSGR 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02296 1277 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 7 1251 - -
Bva12g02296 1277 SMART kinesin_4 7 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 MobiDBLite consensus disorder prediction 992 1027 - -
Bva12g02296 1277 MobiDBLite consensus disorder prediction 994 1015 - -
Bva12g02296 1277 Coils Coil 378 398 - -
Bva12g02296 1277 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 1251 - -
Bva12g02296 1277 MobiDBLite consensus disorder prediction 1111 1207 - -
Bva12g02296 1277 CDD KISc_KIF4 9 364 - -
Bva12g02296 1277 ProSiteProfiles Kinesin motor domain profile. 9 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 MobiDBLite consensus disorder prediction 1159 1186 - -
Bva12g02296 1277 MobiDBLite consensus disorder prediction 1244 1277 - -
Bva12g02296 1277 MobiDBLite consensus disorder prediction 1078 1098 - -
Bva12g02296 1277 Gene3D Kinesin motor domain 4 396 IPR036961 -
Bva12g02296 1277 Coils Coil 893 913 - -
Bva12g02296 1277 Pfam Kinesin motor domain 41 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva12g02296 1277 Coils Coil 538 569 - -
Bva12g02296 1277 Coils Coil 575 602 - -
Bva12g02296 1277 Coils Coil 618 683 - -
Bva12g02296 1277 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02296 1277 Coils Coil 777 811 - -
Bva12g02296 1277 Coils Coil 723 743 - -
Bva12g02296 1277 MobiDBLite consensus disorder prediction 1230 1277 - -
Bva12g02296 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 396 IPR027417 -
Bva12g02296 1277 Coils Coil 406 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02296 Bva-Chr12 17466614 17475867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02296 6 428 Miscellaneous Gene Families AT5G06670 34.703 2.86e-57 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02296 - - gmx:100817984 1766.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02296 12 17466614 17475867 Bva12g02296 12 17466614 17475867 ECH