Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02294 ATGTCGAAGCTTAACTTGAACAACCAAATAAATCACTCTCAAAAAGCTGCCTTCGCTGGGGCTTTCGTCATTCTTTTGCCGGTTTTCTTTCCCAATCTATTTGGCCCTTTGGGTCGTGCTTCGCCTTCTATGTTCTCAGAGTGGAATGCTCCAAAACCTAGACATGTGACTCTGCTAGAGGGTGCTTTGCAAAGCCACACTtCTACTCAACAAGAAACCAACCTCTGGTCTCCTTTGGCTTACCAAGGGTGGAAACCTTGTAATGAGCCTCCAAAATTATCATCACAACCCGAAAGAACTCAGGGTTATATCCAGGTTTTCCTTGATGGAGGGTTGAACCAGCAGAAGATGGGGATATGTGATGCTGTTGCTgttgcaaaaattttgaatgcgACACTGGTGATCCCACATTTTGAAGTGAATCCTGTTTGGCAAGATTCGAGTTCATTTgctgaaatatttgatgtggATCACTTCATTGATGTTCTCCGTGATGAAGTATCTATAGTGAAAGAACCCCCTAGTGAATATTATTGGAGTACAAGGGAGTACTATGCCACGGGCATAAGAGCTACTAGGGTTAAGACAGCTCCCCTTCAAGCTACTGCTGACTGGTACATAGAAAATGTCTTGCCTGTACTTCAGAGTCATGGGATTGCTGCTATTTCACCTTTCTCTCACCGTTTGACATTCAATAACTTATCATCAGACATCCAGCGTCTCCGTTGCAAGGTTAATTTTCAGGCACTGGTCTTTGTTCCTCGTGTCAGGGAATTAGGAAAGACTATTGTTCATCATCTCCGCTATACTCCTAGCATTAACCAAGAAGCAGCAAAAGGGTATCTGCACGAAGGATCTGATATATCTGGAAAACAGCAAAGTGGGAAGTTTGTTGTGTTGCATCTGCGTTTTGACAAAGATATGGCTGCTCATTCAGCATGTGATTTTGGTGGGGGTAAAGCTGAGAAACTCGCTCTAGCGAAATACCGGCAGGTACTTTGGCAGGGAAGGGTAATGAACTCTCAATTTACTGATGAAGAATTGAGAAACCAAGGGCGTTGCCCGCTGACTCCTGAAGAGATAGGTTTGCTCCTGGTAGCTTTGGGCTTTAACAATAGAACCCGGCTTTATCTTGCTTCACACAAGGTTTATGGAGGAGAAGCTAGGATAGCGACTTTACGGAAACTATTTCCTCTTATGGAAGATAAGAAGAGCCTCGCCTCTGCAGAGGAACGTGCCAACGTTGAAGGCAAAGCATCTTTATTGGCTGCCGTCGATTATTACGTAAGCATGCAGAGTGACATCTTTATTTCTGCTTCTCCGGGGAACATGCACAATGCTTTGTTGGGACATCGTGCttatatgaatatgaagaCTATCAGGCCAAACATGGTACTGTTAGGCCAGCTCTTTCAGAATAAAAGTATGGGATGGTTAGAATTTCAACGTGCCGTTCTTGATGGACATAAAAACAGACAAGGGCAGATCAGACTAAGAAAGGAGAAGCAATCTATTTATACTTACCCTGCCCCTGATTGCATGTGTAGAGCTTA 1553 0.4263 MSKLNLNNQINHSQKAAFAGAFVILLPVFFPNLFGPLGRASPSMFSEWNAPKPRHVTLLEGALQSHTSTQQETNLWSPLAYQGWKPCNEPPKLSSQPERTQGYIQVFLDGGLNQQKMGICDAVAVAKILNATLVIPHFEVNPVWQDSSSFAEIFDVDHFIDVLRDEVSIVKEPPSEYYWSTREYYATGIRATRVKTAPLQATADWYIENVLPVLQSHGIAAISPFSHRLTFNNLSSDIQRLRCKVNFQALVFVPRVRELGKTIVHHLRYTPSINQEAAKGYLHEGSDISGKQQSGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVLWQGRVMNSQFTDEELRNQGRCPLTPEEIGLLLVALGFNNRTRLYLASHKVYGGEARIATLRKLFPLMEDKKSLASAEERANVEGKASLLAAVDYYVSMQSDIFISASPGNMHNALLGHRAYMNMKTIRPNMVLLGQLFQNKSMGWLEFQRAVLDGHKNRQGQIRLRKEKQSIYTYPAPDCMCRA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02294 517 PIRSF UCP009360 2 517 IPR024709 -
Bva12g02294 517 CDD O-FucT_plant 103 460 IPR024709 -
Bva12g02294 517 Pfam GDP-fucose protein O-fucosyltransferase 103 455 IPR019378 -
Bva12g02294 517 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 6 517 - -
Bva12g02294 517 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 6 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02294 Bva-Chr12 17454068 17458387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02294 75 515 Miscellaneous Gene Families AT1G22460 32.755 5.96e-83 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02294 - - mtr:MTR_3g100310 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02294 12 17454068 17458387 Bva12g02294 12 17454068 17458387 ECH