Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02282 ATGCACACTACTGCCAGTGCACCACCTAGCTTCCTCGCCACCATGGATGCTAAACTTATCACTGCCTTACTTGTTTTGTCTGCAATTTACACCTCTGCCACTGCCAACACTGCCTTTGACCCTTGTACTTCTCAACGCGATGACGCGGACCTCACCGTTATTCCAATCTACGGCAAATGCTCACCCTTCGATGCACCCAAAACAGAGTCGTGGATCAACACGGTCATAGACATGGCCTCAAAGGACCCGGAACGGGTCAAGTACTTGTCTACCCTCGTGTCCCAGAAATCCGTTTCCTCGGCCCCAATTGCTTCGGGTCAGGCATTTAACATTGGCAACTACGTGGTCCGGGCCACACTCGGTACCCCGGGTCAACTCATGTTCATGGTCCTGGACACCAGCAGTGATGAGGCGTGGGTCCCATGCTCCGGTTGCCTCGGGTGCTCCGCCACCACTTTCTCGCCCAAAACCTCAATCACTTACGGGTCATTGGATTGCTCCGTCCCGCAATGCAGTCAGGTCCGTGGCCTCTCGTGCACCGCCACAGGCACGGGCGCATGCTCCTTCAACCAGTCTTACGCCGATTCATCATTCTCGGCTACGCTCGTGCAAGACTCGCTCAAATTAGCCGCTGATGTCATCCCGAACTACGCTTTCGGCTGCATCAGCGCCATCTCCGGTGGGTCAATTCCAGCCCAAGGGTTGTTGGGCCTGGGTCGTGGACCCTTGTCGCTGCTTTCACAATCCGGGTCACTCTACTCGGGTGTGTTCTCCTACTGCCTCCCCAGTTTCAAGTCCTACTACTTCTCCGGGTCATTGAAACTGGGACCCGTGGGTCAACCCAAGAGCATCCGGACCACTCCGCTTTTACGCAACCCCCACCGTCCATCTTTATACTACGTGAACCTGACCGGAGTCAGCGTGGGTCGCACTCTCGTCCCTCTGCCCGGTGACCTCTTGGCTTTCAACCCAAACACCGGAGCTGGAACCATCATTGATTCGGGTACGGTCATAACCCGATTCGTGGAACCCGTATACAACGCAATCAGGGACGAGTTCAGGAAACAGGTGAAAGGCCCATTTTCTAGCTTGGGGGCTTTCGACACATGCTTCATTAAAACATACGAGACCCTAGCCCCAACAATTACACTGCATTTCACTGGGTTGGACTTGACGTTGCCATTGGAGAACAGCTTGATTCATAGCAGTTCAGGGACACTGGCTTGCCTGGCTATGGCGGCGGCGCCCAATAATGTGAACTCGGCGTTGAATGTGATTGCCAACTTGCAGCAACAGAACCTCAGGATTTTGTTTGATACCGTTAATAATCGGGTAGGCATAGCTCGTGAACTCTGTAACTA 1361 0.54 MHTTASAPPSFLATMDAKLITALLVLSAIYTSATANTAFDPCTSQRDDADLTVIPIYGKCSPFDAPKTESWINTVIDMASKDPERVKYLSTLVSQKSVSSAPIASGQAFNIGNYVVRATLGTPGQLMFMVLDTSSDEAWVPCSGCLGCSATTFSPKTSITYGSLDCSVPQCSQVRGLSCTATGTGACSFNQSYADSSFSATLVQDSLKLAADVIPNYAFGCISAISGGSIPAQGLLGLGRGPLSLLSQSGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGVSVGRTLVPLPGDLLAFNPNTGAGTIIDSGTVITRFVEPVYNAIRDEFRKQVKGPFSSLGAFDTCFIKTYETLAPTITLHFTGLDLTLPLENSLIHSSSGTLACLAMAAAPNNVNSALNVIANLQQQNLRILFDTVNNRVGIARELCN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02282 453 SUPERFAMILY Acid proteases 107 452 IPR021109 -
Bva12g02282 453 Gene3D Acid Proteases 277 453 IPR021109 -
Bva12g02282 453 Pfam Xylanase inhibitor C-terminal 299 448 IPR032799 -
Bva12g02282 453 PANTHER ASPARTYL PROTEASE AED3-LIKE 19 453 - -
Bva12g02282 453 Pfam Xylanase inhibitor N-terminal 114 276 IPR032861 -
Bva12g02282 453 Gene3D Acid Proteases 90 276 IPR021109 -
Bva12g02282 453 PANTHER ASPARTYL PROTEASES 19 453 IPR001461 GO:0004190|GO:0006508
Bva12g02282 453 ProSiteProfiles Peptidase family A1 domain profile. 114 448 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02282 Bva-Chr12 17393837 17395198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02282 104 453 Miscellaneous Gene Families AT1G77480 27.577 3.88e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02282 - - gmx:100816307 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02282 12 17393837 17395198 Bva12g02282 12 17393837 17395198 ECH