Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02280 ATGGGTGTCAAAGGATTTGTTGAAGGTGGGATAGCATCCATTGTGGCTGGATGCAGCACACACCCACTGGATTTAATCAAGGTCCGAATGCAGCTTCAGGGTGAGAAACTCCCAGTGAACCCTCAACCAGTTCACAATCTGCGCCCAGCTTTTGCATTCCATTCTCATGCTCCAACAATGGCGGCTCCTACCTCATTGGGAATCCCAACTCCACCTCAAGCTCGTGCAGGACCCATCTCGGTTGGGTTAAAAATTGTCCAATCTGAAGGTGTCGCAGCCCTCTTCTCGGGTGTATCAGCTACTGTGCTCCGCCAAACACTCTATTCCACCACCCGTATGGGTCTATATGATATGCTGAAGCAAAGATGGACTGACCCGCAACAAGGAAACATGCCTTTGATCCGAAAGATCACAGCGGGTTTAATCGCCGGCGGGATTGGTGCCGCCGTTGGGAACCCTGCTGACGTGGCCATGGTCCGTATGCAAGCCGATGGTCGACTCCCGGCAGCTCAGCGGCGCAATTACAAAGGCGTATTCGATGCAATTACGCGCATGTCCAAGCAGGAAGGGGTAGCTAGCCTGTGGCGCGGTTCGGGACTTACAGTGAACCGTGCTATGATCGTGACGGCTTCTCAATTGGCGTCGTATGATCAATTCAAGGAGATGATTCTGGAAAAGGGATTGATGAAGGATGGGCTTGGGACCCACGCGACGGCGAGCTTTGCAGCGGGGTTTGTGGCTGCGGTGGCGTCGAACCCGGTGGATGTGATCAAGACGAGGGTGATGAACATGAAGGTGGAGGCAGGGGAAACGCCGCCTTATAGTGGGGCCTTGGATTGTGCTCTCAAGACGGTGAGAGCAGAAGGGCCTATGGCTCTTTACAAAGGATTTATTCCCACAATTTCAAGGCAGGGACCTTTCACCGTGGTCCTGTTCGTGACACTTGAACAAGTGAGGAAGGCTCTCAAGGAATTTTA 977 0.5302 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGEKLPVNPQPVHNLRPAFAFHSHAPTMAAPTSLGIPTPPQARAGPISVGLKIVQSEGVAALFSGVSATVLRQTLYSTTRMGLYDMLKQRWTDPQQGNMPLIRKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPAAQRRNYKGVFDAITRMSKQEGVASLWRGSGLTVNRAMIVTASQLASYDQFKEMILEKGLMKDGLGTHATASFAAGFVAAVASNPVDVIKTRVMNMKVEAGETPPYSGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKALKEF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02280 325 Gene3D Mitochondrial carrier domain 4 324 IPR023395 -
Bva12g02280 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 321 IPR018108 -
Bva12g02280 325 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5 1 325 - -
Bva12g02280 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 222 IPR018108 -
Bva12g02280 325 SUPERFAMILY Mitochondrial carrier 4 318 IPR023395 -
Bva12g02280 325 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 325 - -
Bva12g02280 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 122 IPR018108 -
Bva12g02280 325 Pfam Mitochondrial carrier protein 4 122 IPR018108 -
Bva12g02280 325 Pfam Mitochondrial carrier protein 131 225 IPR018108 -
Bva12g02280 325 Pfam Mitochondrial carrier protein 234 323 IPR018108 -
Bva12g02280 325 PRINTS Mitochondrial brown fat uncoupling protein signature 310 325 IPR002030 GO:0006839|GO:0031966
Bva12g02280 325 PRINTS Mitochondrial brown fat uncoupling protein signature 116 128 IPR002030 GO:0006839|GO:0031966
Bva12g02280 325 PRINTS Mitochondrial brown fat uncoupling protein signature 228 246 IPR002030 GO:0006839|GO:0031966
Bva12g02280 325 PRINTS Mitochondrial brown fat uncoupling protein signature 185 202 IPR002030 GO:0006839|GO:0031966
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02280 Bva-Chr12 17388583 17389898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02280 1 324 Miscellaneous Gene Families AT5G09470 61.652 5.93e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02280 K15104 - vvi:100245527 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02280 12 17388583 17389898 Bva12g02280 12 17388583 17389898 ECH