Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02279 ATGACTAACCGAAATGCTGAAGTGTCCCAGGGAGATGGTAATGCTTCCCTTCGCCCTCAGCCTGGGCAACCAGATCATTTGACTACGCAAGGCAACAATACGATTTTCAAGAGCGGGCCACTTTTCTTATCTTCAAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACGCACTTCGTTGGTCTTCTTCAGAAGTGATCCAAGTGCTGTTCCTCAGAAAGGAAGTGAAGTGAATTTAACCCTTGGCGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTGAAAGCAGATAAGAAACTTTTGACAGTGGTTTTTCCTGATGGTCGGGATGGAAGAACTTTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAAACTGCACTTGAGAATGCTTTGGCACAAGCACCAAGTACTGCTAATGCGACAGGACAAAATGGCATCTTCAGGAAAGATCAGAGTGATTCAAATGACAATTCTTCGGACCAGTTGAAGGATAGAGAACCACCAAAATCTACAGTTATTGGTCGGCCAGTTTTACTTGCTCTGGAGGATGTTGATGGAGCTCCATCTTTTTTGGAGAAAGCTCTTAGGTTCATAGAAGATCATgGACTCAAAGTAGAAGGGATCCTGCGACAAGCAGCTGATGTTGATGATGTAGAACGTAGAGTTCGGGAGTATGAAGAAGGAAAAGTTGAGTTTACCCCAGGGGAAGATGCACATGTTATTGGTGATTGTATCAAGTATGTACTTCGGGAACTGCCATCATCTCCAGTCCCTGCATCTTGTTGCAGAGCACTTTTAGCAGCATGCCGAACTGAACGTGCTAGTAGAGTTCCTGCCATGCGTGCAGCAATATGTGATACTTTCCCTGAGCCAAATCGTCGTTTGTTGCAAAGAATACTCTTGATGATGCAACGTGTGGCTTCCAACAAAAATGAGAACAAAATGAGCACCTCAGCTGTGGCAGCCTGCATGGCACCCTTACTTCTTCGTCCCCTTCTAGCTGGAGAGTGTGAGattgaaagtgattttgatGTGGGTGGTGATGGTTCTCTTCAACTTCTACAAGCAGCTGCTGCAGCCAACCATGGCCAAACTATTGTTATGACTTTATTAGAAGAGTATGACAGCATATTTGGGGAAGGTTCTGTGTCCCCTGATTTATACACTGATTCTGAAGAAAGTGGATCTGAGGATGAAGAGGAAGAGGTTACTGATGATGGGTCctatgaagatgatgatggtgaAGGTTCCTattatgatgatgaagaagaggaCGAATCAATACATGAGTCCGATGCAGATGACAATGTTATTAGTGAAGCCGGCAGCGAGACTGGAGACTCTGATGGCTATGATGAGAATGATGATAAGGACCATGATCGTGTTAGTTCAAGTTCGAAATCCTCAGGCGTGAGTGAAGATCATAAAGTCAATCAAATGTCATCAAATTCAACGGAGGTCTCACAGCCGCAGCATGAAGATGTCAAAAGCCgcaaaaatctcaagatttcAACAAAAACTGGTAGTGCAGCAGAACACAATAAGCCTGCTGAAATATCTGAAGGTGTTCCCACAGACCAAAGTAATGAGCACGATTTAAGTGGTTCTATGCCTTCatcatgtattaaaaaatctgCAACCATGACCGATAGCCCAGATCATAATTCTCAGCGTCGCACTGTATGGGGACGTACCTCTGCAAAGAAGAACCTTTCCATGGAATCTATTGACCTTCATGTTGAAGAAACTGAAATTGAGAAGCTTGAGGCTACTAAGACAGAATTGCAAAACCAACATGCTCGGGAGGTTGAAAAGAATGCAAAGCTGCAATCTGATCGGGAAAAACGGAAGAAAGCCTTACATGAGCGTCGTCTGGCTCTAGAGAAAGACGTGGCTAAACTACAGGAACAGTTGcgaaaagagaagaatattaGGGCAACTATTGAAGCAGGACTCAAAACTCCTCAAGAACCCTTATCCAATTCAACCAGTGTTGACGAAAAGaCCAAGGCAGAACTTGAGGAATTAGCTCTGGTAGAAGCAGATCTCAGCAATTTAGAACAGAAGGTTATTGATCTGGGGGTGCGGCTTAATCGACAACGTGAAGGGAACCATGGTTCTTCATTGAATATCAGTAATCAACCCCAGCAGATATcaaatcaagaaataaaattGAAGAATAAGCCGGATACTGCAGTTACAGCCACTTCGCAATCTGAGAAGTCTAGAAGTAAGGATGCTAAAGCtgaaaatgagaatgagagGAAGCCAGAATCAACACCTTTACCAAGCAAACATCAATCTCATAGTAATTCCAAGAAATCCAGTACAAAGGGCGAGGGAGCAAATTCCACTAGTTCCGCATTGTCAAAACTGACATCCAGACTAAACTTTTTGAAGGAGCGACGTACCCAGATAGCGAATGAACTCCACAACATGGACAAAGGGAGGGACTCATCGGCGAAAAATTCCGAAAAGGGAAGTCGCCAACCATTGTCACCCCCCAAGAAGTCTCGAGGCGAAAGTGATGAAGGTTCAACTAAAGAAGGCAAATCACTAGAGAGTTTagagaaatttagaaaatcaGAAAGCCATCCAGCCCATCACTCGGAAAAATGGAACCAACATCCACAGACCCTGGAACGAGGAAAATCAGAAAGCCGTTCATCTTATAATGCTGATAAAGGAAGATG 2720 0.4158 MTNRNAEVSQGDGNASLRPQPGQPDHLTTQGNNTIFKSGPLFLSSKGIGWTSWKKRWFILTRTSLVFFRSDPSAVPQKGSEVNLTLGGIDLNNSGSVVVKADKKLLTVVFPDGRDGRTFTLKAETTEDLYEWKTALENALAQAPSTANATGQNGIFRKDQSDSNDNSSDQLKDREPPKSTVIGRPVLLALEDVDGAPSFLEKALRFIEDHGLKVEGILRQAADVDDVERRVREYEEGKVEFTPGEDAHVIGDCIKYVLRELPSSPVPASCCRALLAACRTERASRVPAMRAAICDTFPEPNRRLLQRILLMMQRVASNKNENKMSTSAVAACMAPLLLRPLLAGECEIESDFDVGGDGSLQLLQAAAAANHGQTIVMTLLEEYDSIFGEGSVSPDLYTDSEESGSEDEEEEVTDDGSYEDDDGEGSYYDDEEEDESIHESDADDNVISEAGSETGDSDGYDENDDKDHDRVSSSSKSSGVSEDHKVNQMSSNSTEVSQPQHEDVKSRKNLKISTKTGSAAEHNKPAEISEGVPTDQSNEHDLSGSMPSSCIKKSATMTDSPDHNSQRRTVWGRTSAKKNLSMESIDLHVEETEIEKLEATKTELQNQHAREVEKNAKLQSDREKRKKALHERRLALEKDVAKLQEQLRKEKNIRATIEAGLKTPQEPLSNSTSVDEKTKAELEELALVEADLSNLEQKVIDLGVRLNRQREGNHGSSLNISNQPQQISNQEIKLKNKPDTAVTATSQSEKSRSKDAKAENENERKPESTPLPSKHQSHSNSKKSSTKGEGANSTSSALSKLTSRLNFLKERRTQIANELHNMDKGRDSSAKNSEKGSRQPLSPPKKSRGESDEGSTKEGKSLESLEKFRKSESHPAHHSEKWNQHPQTLERGKSESRSSYNADKGR 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02279 906 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 11 828 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 711 749 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 142 179 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 845 906 - -
Bva12g02279 906 ProSiteProfiles Rho GTPase-activating proteins domain profile. 188 387 IPR000198 GO:0007165
Bva12g02279 906 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 11 828 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 711 906 - -
Bva12g02279 906 Pfam PH domain 37 140 IPR001849 -
Bva12g02279 906 MobiDBLite consensus disorder prediction 1 31 - -
Bva12g02279 906 Pfam Leucine-zipper of ternary complex factor MIP1 629 709 IPR025757 -
Bva12g02279 906 Gene3D - 25 142 IPR011993 -
Bva12g02279 906 SUPERFAMILY PH domain-like 29 149 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 474 499 - -
Bva12g02279 906 SUPERFAMILY GTPase activation domain, GAP 196 389 IPR008936 GO:0007165
Bva12g02279 906 MobiDBLite consensus disorder prediction 530 575 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 390 575 - -
Bva12g02279 906 SMART PH_update 35 143 IPR001849 -
Bva12g02279 906 MobiDBLite consensus disorder prediction 772 803 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 162 179 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 605 629 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 400 440 - -
Bva12g02279 906 Coils Coil 587 621 - -
Bva12g02279 906 CDD PH 37 136 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 658 677 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 750 771 - -
Bva12g02279 906 SMART RhoGAP_3 194 384 IPR000198 GO:0007165
Bva12g02279 906 Coils Coil 798 818 - -
Bva12g02279 906 ProSiteProfiles PH domain profile. 34 141 IPR001849 -
Bva12g02279 906 MobiDBLite consensus disorder prediction 142 161 - -
Bva12g02279 906 Pfam RhoGAP domain 197 340 IPR000198 GO:0007165
Bva12g02279 906 Coils Coil 626 653 - -
Bva12g02279 906 MobiDBLite consensus disorder prediction 805 833 - -
Bva12g02279 906 Gene3D Rho GTPase activation protein 149 388 IPR008936 GO:0007165
Bva12g02279 906 Coils Coil 678 698 - -
Bva12g02279 906 CDD RhoGAP 197 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02279 Bva-Chr12 17376451 17388224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02279 - - gsj:114415231 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02279 12 17376451 17388224 Bva12g02279 12 17376451 17388224 ECH