Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02263 ATGAAAGAGAACCAGGCTCAAACCTCCGAAGACAACCACCGATCGTCGCTTCTGGATCTTGGCAGGGCCGACATCACTGAATCCTCTAACAAAACCCGTAACTGCACCGGTTTGCCAGGCTCGGGGTCCGGGTCGTGCTCGATGGAGTTTCAGGCACCATACCCGGACCAAGTGCTTGAGAATGTTCTGGAGAACGTGCTGCACTTCCTTACCTCCCGTCGTGACCGGAACGCTGCCTCATTGGTCTGCAAGTCGTGGTACCGTGCGGAGGCCCTCACACGATCCGAACTCTTCATAGGTAACTGTTATGCGGTGGCGCCCCGCCGCGCAATTGGCCGGTTCACGCGTGTTCGTTCCGTGACGATTAAAGGGAAGCCAAGGTTCGCTGACTTCGATCTGATGCCGCCCAACTGGGGGGCCTTCTTTTCGCCATGGATCACTGCCTTGGCCAAGGCTTACCCTTGGCTTGAGAAGGTTTATCTTAAGCGCATGCATGTAGCAGGCGACCATCTGGTACTTCTGGCCGAGTCCTTCCCTGGGTTCAAAGAGCTTGTCCTTGTATGCTGTGAAGGGTTTGGTTCCATTGGACTGGCCGCGATTGCAAGCAAGTGcagACAGTTGAGAGTACTTGATCTCGTCGAATCTGAGGTTGACGACGATGAAGTGGACTGGCTATCTTGTTTTCCAGAGAGTCAAACGTATCTGGAATCTCTTGTTTTTGACTGTCTGGAGTTTCCAGTAAATTTGGAGGCATTGGAGAGGCTAGTGGCTAGGTCACCGTCGTTAAAGAAGCTTAGGTTGAATCGTTATGTTTCCTTGTCTCATCTATATCGCCTAATCATTCGAGCACCGCAGCTTACACATCTTGGGACGGGCTCGTTCAGTCTGTCAGAGGATGCAGCTGTTGTGGGTGATCAGGAGCCAGATTATACCTCTGCTTTTACGGCCTGCAAATCCTTAGTTTGTCTATCTGGATTCAGGGAGATTTTACCGGATTACTTACCCGCTATCTACCCAGTTTGTGCTAATCTGACATCTTTGAACTTTAGTTATGCGGATGTTAATGCAGAACAACTCAAATCAATTATACGCCACTGCCATAAACTCCAGACATTCTGGGTCTTGGATTCAATATGTGATGAGGGCCTTCAAGCAGTTGCTGCAACTTGCAAGGATTTACGTGAGCTTCGTGTTTTCCCTGTAGATGCCCGTGAGGATACAGAGGGGCCAGTTTCTGAGGTGGGCTTTCAAGCGATTTCCGAGGGTTGTAGGAAATTGCAATCGATTTTATATTTCTGCCAAAGGATGACAAATGCGGCTGTGATAGCTATGTCAAAGAACTGCCTGGATCTTGTGGTCTTTCGGCTGTGTATAATAGGGCGATACCGGCCAGACCATGAGACTGGAGAACCCATGGATGAGGGTTTTGGTGCTATTGTTATGAACTGCAAGAAGCTCACTCGACTTGCTGTATCTGGTTTACTGACTGATCGAGCTTTTGCTTACATTGGGAAGTATGGGAAACTGGTTAGGACGCTGTCATTTGCCTTTGCTGGAGATACTGATACGGGTCTCAGATACGTGCTCGAAGGATGTCGTAAGCTGCAAAAACTTGAAATCAGGGATTGTCCATTTGGGGATGGAGCTTTACGTTCTGGTATGCATCATTATTACAACATGAGATTTCTCTGGATGTCTTCCTGTAGAGTGACCCGCCAAGCTTGCCAAGAAGTTGCACGAGCATTGCCCCATGTGGTTTTGGAAGTGATGAGGAACGGTGGAGACGAGGGGAATGATACTGTTGAGATCTTGTACATGTATAGGTCTATGGATGGCCCGAGGGATGATGCCCCGGAAGTTGTTACCATCATGCAATA 1877 0.4907 MKENQAQTSEDNHRSSLLDLGRADITESSNKTRNCTGLPGSGSGSCSMEFQAPYPDQVLENVLENVLHFLTSRRDRNAASLVCKSWYRAEALTRSELFIGNCYAVAPRRAIGRFTRVRSVTIKGKPRFADFDLMPPNWGAFFSPWITALAKAYPWLEKVYLKRMHVAGDHLVLLAESFPGFKELVLVCCEGFGSIGLAAIASKCRQLRVLDLVESEVDDDEVDWLSCFPESQTYLESLVFDCLEFPVNLEALERLVARSPSLKKLRLNRYVSLSHLYRLIIRAPQLTHLGTGSFSLSEDAAVVGDQEPDYTSAFTACKSLVCLSGFREILPDYLPAIYPVCANLTSLNFSYADVNAEQLKSIIRHCHKLQTFWVLDSICDEGLQAVAATCKDLRELRVFPVDAREDTEGPVSEVGFQAISEGCRKLQSILYFCQRMTNAAVIAMSKNCLDLVVFRLCIIGRYRPDHETGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFAYIGKYGKLVRTLSFAFAGDTDTGLRYVLEGCRKLQKLEIRDCPFGDGALRSGMHHYYNMRFLWMSSCRVTRQACQEVARALPHVVLEVMRNGGDEGNDTVEILYMYRSMDGPRDDAPEVVTIMQ 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02263 625 Gene3D - 50 94 - -
Bva12g02263 625 SUPERFAMILY F-box domain 55 89 IPR036047 GO:0005515
Bva12g02263 625 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g02263 625 Pfam F-box 56 95 IPR041567 -
Bva12g02263 625 Gene3D Ribonuclease Inhibitor 96 624 IPR032675 -
Bva12g02263 625 Pfam Transport inhibitor response 1 protein domain 116 161 IPR041101 -
Bva12g02263 625 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 43 623 - -
Bva12g02263 625 SMART LRR_CC_2 532 556 IPR006553 -
Bva12g02263 625 SMART LRR_CC_2 483 506 IPR006553 -
Bva12g02263 625 SMART LRR_CC_2 178 203 IPR006553 -
Bva12g02263 625 SMART LRR_CC_2 423 447 IPR006553 -
Bva12g02263 625 SUPERFAMILY RNI-like 133 572 - -
Bva12g02263 625 PANTHER F-BOX PROTEIN FBX14 43 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02263 Bva-Chr12 17274070 17277471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02263 - - jre:108982026 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02263 12 17274070 17277471 Bva12g02263 12 17274070 17277471 ECH