Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02262 ATGAGGACCAtttctgaaaatatttctcatctatctttttctgctattttctttttcctggtACGAGTGGAGGGATCTGTTCAGAAAGTCTCTGAAGAGGAATCAGAGCAGTATTTCCACAGCCGTCCACGGGGAAGTCAGCTCGGAGCAATAGTTAGCAAGCAGAGTACTGTAGTGCCTGGAAGGCTTGTTCTTTACCAGGAGTACGAAGAGTTGGATCAGAAGTTTGCTGACGGaagtttgatcCCTAAACCTAAGAACTGGGGAGGATACAGGCTAACGCCGCAACTGTTTGAATTTTGGCAAGGACAGCTGTCTCGCTTACATGACAGGCTGCGGTATTCTCCCTATGAAATTGACGGACAACTAGCATGGAAGGTTGAGAGGTTGGCTCCCTG 398 0.4221 MRTISENISHLSFSAIFFFLVRVEGSVQKVSEEESEQYFHSRPRGSQLGAIVSKQSTVVPGRLVLYQEYEELDQKFADGSLIPKPKNWGGYRLTPQLFEFWQGQLSRLHDRLRYSPYEIDGQLAWKVERLAP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02262 132 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 88 132 IPR019576 -
Bva12g02262 132 Gene3D - 16 132 IPR012349 -
Bva12g02262 132 SUPERFAMILY FMN-binding split barrel 18 132 - -
Bva12g02262 132 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 21 132 IPR000659 GO:0004733|GO:0008615|GO:0010181
Bva12g02262 132 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 98 111 IPR019740 GO:0016638
Bva12g02262 132 PANTHER PYRIDOXINE-5'-PHOSPHATE OXIDASE 21 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02262 Bva-Chr12 17267045 17269981 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02262 K23998 - gmx:100795497 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02262 12 17267045 17269981 Bva12g02262 12 17267045 17269981 ECH