Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02258 ATGTCTCAATGCACGCAACTGCTAAACCCTCCCAAAACCTTCGACACCAAAATCCTACCCATAAAAACCCTTCCTTCGACTAGGACCAATttgaaattcaagaaattcTCAACGATCTCCGCCCCAGTGATGCGAAGCCAAAATCAAACACAAGGTCAGCAACAATTATCCTTGGTTGATGCTCTGCTAAATAGCAATCGCAAAGAAGAAGCTCTTGCTGCCATCAGAAGCTCTTTGTCTAATCGGCTCTCTGAAACAAACCTTCAGCTGACAGTTCCGGGTCTCAAGTCCAAAACCAGGGGCAAGGTTCGAGATATTTATGACAGTGGGGACTATCTAGTTTTAGTGACGACCGATCGGCAGAGTGCATTTGACAGAATTCTTGCTTCGATTCCTTTCAAAGGCCAGGTTCTTAACGAGACAAGTTTGTGGTGGTTTGAAAAGACCAAGCACATAACTTCTAATGCAGTTGTATCTTCCCCAGATAAAAATGTTACTATAGCAAAAAAATGCTCAGTTTTTCCAGTTGAATTTGTCGttAGAGGTTTTGTGACTGGAAGCACCGATACATCGTTATGGACAGTCTACAAAAATGGCATCCGCAACTACTGTGGAAACGTCCTCCCAGATGgatttttaaaaaatcaaaagcttGCTGAAAATATACTCACGCCAACAACTAAGGCTGCAGATCATGATGTTCCTGTAACTCCTGATGAGATTATTAAAAGTGGACTTATGACTAGAACTGATTACGAAGAAGCAAGTAGAAAAGCATTAAGCTTATTTGAATATGGACagCAGGTGGCATTGGAACATGGTCTCATATTGGTGGACacaaaatatgaatttggGAAGGCAAATGATGGTTCAATTCTGTTGATTGATGAGGTGCATACTCCTGATTCAAGTAGATATTGGATTGCAAATTCTTACATGGAACGCTTTGAAAATGGTCTTGAGCCGGAAAATGTTGATAAGGAGTTTTTGAGGCTATGGTTCACAAGTCACTGCAACCCCTATGAAGATGAGGTCCTTCCTGATGCTCCCGAAGATCTTGTTTGTGAATTGGCTTGGCGATACATTTTCCTGTACGAGACCATAACAAACTCGAACTTTGAATTTCCATTAACTGAGGAACCAATAGATGACCGTATTTCACGAAATGTTGCTTCCGCACTATCATCTCTAAATTA 1196 0.3988 MSQCTQLLNPPKTFDTKILPIKTLPSTRTNLKFKKFSTISAPVMRSQNQTQGQQQLSLVDALLNSNRKEEALAAIRSSLSNRLSETNLQLTVPGLKSKTRGKVRDIYDSGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFEKTKHITSNAVVSSPDKNVTIAKKCSVFPVEFVVRGFVTGSTDTSLWTVYKNGIRNYCGNVLPDGFLKNQKLAENILTPTTKAADHDVPVTPDEIIKSGLMTRTDYEEASRKALSLFEYGQQVALEHGLILVDTKYEFGKANDGSILLIDEVHTPDSSRYWIANSYMERFENGLEPENVDKEFLRLWFTSHCNPYEDEVLPDAPEDLVCELAWRYIFLYETITNSNFEFPLTEEPIDDRISRNVASALSSLN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02258 398 Pfam SAICAR synthetase 99 344 IPR028923 -
Bva12g02258 398 ProSitePatterns SAICAR synthetase signature 2. 277 285 IPR018236 GO:0004639|GO:0006164
Bva12g02258 398 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 95 370 IPR028923 -
Bva12g02258 398 PANTHER BNAC03G41880D PROTEIN 21 397 - -
Bva12g02258 398 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 21 397 - -
Bva12g02258 398 ProSitePatterns SAICAR synthetase signature 1. 173 187 IPR018236 GO:0004639|GO:0006164
Bva12g02258 398 Gene3D - 177 318 - -
Bva12g02258 398 SUPERFAMILY SAICAR synthase-like 88 373 - -
Bva12g02258 398 CDD SAICAR_synt_Sc 100 369 - -
Bva12g02258 398 Gene3D Phosphorylase Kinase; domain 1 82 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02258 Bva-Chr12 17251687 17255825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02258 K01923 - qsu:111997063 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02258 12 17251687 17255825 Bva12g02258 12 17251687 17255825 ECH