Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02253 ATGGGGAGCATCGACAGAGAGCAAGATGGCAATGATCTCAACCAATCTCTGTTgccaaaacaagaagaaaatgatcaaACTCGGGAAAAAGGGGATTTTTCGAATAAGCTCTGGATTGAAACCAAGAAGCTATGGTTCATCGTCGGTCCCTCTATCTTCAGCCGTGTGGCGGCTTTCACCATGAACGTCGTCACTCAAGCTTTCGCTGGTCACCTGGGTGATGTTCAGCTCGCTTCTATTTCTATTGCCAACACCGTCATCGTTGGCTTCAACTTTGGCCTCCTAttAGGGATGGCAAGCGCACTGGAGACGCTGTGCGGGCAAGCGTTCGGGGCAAAGAGGTATCATATGCTGGGCATTTACATGCAAAGGTCGTGGATTGTTCTGTTCTTTTGCTGTTTCTTGCTATTGCCCTTTTACGTTTTTGCGACTCCGATTCTCAAACTTTTCGGACAGCCTGAAGACGTCGCAGAGGAGTCGGGGATTGTGGCTCTCTGGCTCATACCGCTTCATTTCAGCTTCGCATTTCAGTTCCCCCTGCAGAGGTTCCTGCAGTGCCAGCTGAAGACCCCTGCCATTGCTTGGGTTTCTGTTCTGGGTTTAATCGTGAATGTGCTAACGAGCTGGCTCTTCGTCTTTGTCTGGGATTTTGGAGTTGTGGGTGCAGCTATTGCTCTCGACATCTCTTGGTGGGTCCTGGTATTTGGCTTGTATGGTTATGTAGTTTATGCCTGCCCTTTAACTTGGACTGGTTTCTCCATAGAAGCCTTTTCTGGACTCTGGGAATTTCTCAAACTCTCTATTGCTTCTGGGATAATGCTCTGCTTAGAAAACTGGTACTATAGGATACTAATACTGATGACTGGGCATTTGAAGAATGCCACTGTTGCAGTGGATGCCTTGTCAATATGTATGACTATCAACGGCTGGGAAATGATGATTCCTCTGGCTTTCTTTGCTGGTGCTGGAGTAAGGGTGGCGAACGAGCTAGGAAGCGGGAACGGCGAAGGCGCCAAATTTGCAACGCTAGTATCAGTGCTAGAATCAACGGCGATAGGGCTCTTCTTTTGCGTCATCATAATGATATTCCATAATCAGTTCGCTTACATATTCACCACCAGTACGGACGTGCTTGAATCCGTTGATGACATGGCGTTTCTTTTAGCTGTCACAATTCTCCTCAACAGTGTTCAACCCGTTTTGTCAGGAGTGGCGGTGGGACGGGATGGCAAGTCAAGGTa 1241 0.473 MGSIDREQDGNDLNQSLLPKQEENDQTREKGDFSNKLWIETKKLWFIVGPSIFSRVAAFTMNVVTQAFAGHLGDVQLASISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMLGIYMQRSWIVLFFCCFLLLPFYVFATPILKLFGQPEDVAEESGIVALWLIPLHFSFAFQFPLQRFLQCQLKTPAIAWVSVLGLIVNVLTSWLFVFVWDFGVVGAAIALDISWWVLVFGLYGYVVYACPLTWTGFSIEAFSGLWEFLKLSIASGIMLCLENWYYRILILMTGHLKNATVAVDALSICMTINGWEMMIPLAFFAGAGVRVANELGSGNGEGAKFATLVSVLESTAIGLFFCVIIMIFHNQFAYIFTTSTDVLESVDDMAFLLAVTILLNSVQPVLSGVAVGRDGKSR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02253 413 CDD MATE_eukaryotic 40 407 IPR045069 GO:0042910|GO:1990961
Bva12g02253 413 TIGRFAM matE: MATE efflux family protein 50 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva12g02253 413 Pfam MatE 50 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva12g02253 413 Pfam MatE 271 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva12g02253 413 PANTHER PROTEIN DETOXIFICATION 24 408 - -
Bva12g02253 413 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 408 - -
Bva12g02253 413 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02253 Bva-Chr12 17230876 17234523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02253 K03327 - gmx:100500204 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02253 12 17230876 17234523 Bva12g02253 12 17230876 17234523 ECH