Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02244 ATGGCATTCTCCAACGCCTTCATTTTGGGTCTGTTTCTGGCGATCAACATGGCCCTGCCCCTGGGAACCCTGGCAACAGATTACACCGTGGGAGAGACATCAGGTTGGGCGATGGGAGCTGATTACGGCAGCTGGTCTAGTGGCAAGACCTTCGCAGTTGGTGATAGCCTCGTGTTCAACTATGGAGCTGGGCACACTGTGGATGAAGTTAAGGAAAGCGACTACAAATCCTGCACCGCCGGCAATTCACTTACTTCAGACAGCAGTGGCGCCACCACCATTAAGTTGAAAACTGCAGGCACCCATTACTTCATCTGTGCAGTTCCTGGCCACTGTTCCACTGGCATGAAGCTTGCTGTTAACGTCAAGGCTGGAAAAGCTGCTGCTCCCGCCGCAACGCCATCATCGTCCAAAGACTCGCCTGCTGATGATACCCCAGCCACAACCACACCCAGCACATCCACAACAACCACCACTCCAACCACCGCCACGCCAACCACAACCACAAAATCAACTTCTTCGGCCACTAATCTCTCACCAAGTGTTGCTATCTTGATATTTTCTTGGATTTCCTACTGCGTTTTGCGTCTTGTATG 596 0.5218 MAFSNAFILGLFLAINMALPLGTLATDYTVGETSGWAMGADYGSWSSGKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTAGNSLTSDSSGATTIKLKTAGTHYFICAVPGHCSTGMKLAVNVKAGKAAAPAATPSSSKDSPADDTPATTTPSTSTTTTTPTTATPTTTTKSTSSATNLSPSVAILIFSWISYCVLRLV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02244 198 MobiDBLite consensus disorder prediction 129 175 - -
Bva12g02244 198 Gene3D - 24 129 IPR008972 -
Bva12g02244 198 PANTHER BLUE COPPER PROTEIN-LIKE 12 194 - -
Bva12g02244 198 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Bva12g02244 198 CDD Phytocyanin 26 122 - -
Bva12g02244 198 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Bva12g02244 198 MobiDBLite consensus disorder prediction 133 175 - -
Bva12g02244 198 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Bva12g02244 198 PANTHER BLUE COPPER PROTEIN 12 194 IPR039391 GO:0009055
Bva12g02244 198 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02244 Bva-Chr12 17183103 17183953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02244 33 122 Miscellaneous Gene Families AT1G22480 68.889 3.59e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02244 - - gmx:100306522 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02244 12 17183103 17183953 Bva06g02692 06 16986562 16987585 BWGD
Bva12g02244 12 17183103 17183953 Bva12g02244 12 17183103 17183953 ECH