Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02241 ATGGCGCTTCGTTTTGAGGTTCTTGGCAGGTTCAATCGTGCTCGAGCAGCTAGATTGACACTCCCTCACTTTGTGTCCCAGACACCTTTATTTATGCCAGTGGGTACTCAAGGAACAATCAAAGGATTGACAACAAACCAGCTTGAGGAGATTGGTTGCCAAATAATACTTGGAAATACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTATTGATGAAGTGGGTGGTCTCCATAAATTTATGAACTGGCCACGGGCTCTACTTACTGACTCCGGTGGCTTTCAAATGGTATCATTACTGCATCTTGCTGATATCACTGAAAAAGGTGTGACATTTCAGtCACCGGTTGACGGAAAGCCAATGCTCTTAACACCAGAGGAATCTATTCAAATCCAAAATAGAATTGGAGCCGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACGGGCCCACGAATTGAGGAAGCCATGTATAGAACACTAAGATGGATAGACAGATGTATTGCAGCACACAAGAGGCCAAATGATCAGAACTTGTTTGGTATTGTACAAGGTGGTTTAGATCCTGTATTGAGGGATATATGTGTTAGAGGCTTGGTGGATCGGAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCGCAGTGCACTGCTGCTCTACCAGAGGATAAGCCACGATATGTTATGGGAGTTGGTTACCCACTTGATATCGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGATTGTGTTTATCCTACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTGGGGGAGTGCTGAAACTTAAGCACAGAGCAATGGCCGAGGACACTCGATCAATCGATCCTACCTGCGGTTGCATGGTTTGCAAGAACTACACCAGGTCTTACATCCATTGCCTTGTGACGAAAGATGCTATGGGGTCTCAGCTTCTTTCATATCATAATTTGTATCACATGATGCAGCTTAGTCGGGATCTACACTCATCTATAATTGAGGAAAGGTTCCCAAAGTTCGTATGTGAATTTCTACGTAAAATGTTCCCTAAAGGTGATGTTCCCGAATGGGTCTGCAATGCTATGGAGGTTGCCGGAATCGACATTTCTTCCTGCTGTGCTCCATTCTCATCAAGCCAAGAATTCAACAATGGAAATGATTTcagagaagaaattaatgaGGTCAGGATATA 1244 0.4349 MALRFEVLGRFNRARAARLTLPHFVSQTPLFMPVGTQGTIKGLTTNQLEEIGCQIILGNTYHLALRPTSELIDEVGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPNDQNLFGIVQGGLDPVLRDICVRGLVDRNLPGYAIGGLSGGEDKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPGGVLKLKHRAMAEDTRSIDPTCGCMVCKNYTRSYIHCLVTKDAMGSQLLSYHNLYHMMQLSRDLHSSIIEERFPKFVCEFLRKMFPKGDVPEWVCNAMEVAGIDISSCCAPFSSSQEFNNGNDFREEINEVRI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02241 414 Gene3D - 1 367 IPR036511 GO:0006400|GO:0016763
Bva12g02241 414 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 364 IPR004803 GO:0008479|GO:0101030
Bva12g02241 414 Pfam Queuine tRNA-ribosyltransferase 13 365 IPR002616 GO:0006400|GO:0016763
Bva12g02241 414 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 1 389 - -
Bva12g02241 414 SUPERFAMILY tRNA-guanine transglycosylase 1 364 IPR036511 GO:0006400|GO:0016763
Bva12g02241 414 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 5 365 IPR002616 GO:0006400|GO:0016763
Bva12g02241 414 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 5 365 IPR004803 GO:0008479|GO:0101030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02241 Bva-Chr12 17161872 17167855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02241 K00777 - zju:107420738 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02241 12 17161872 17167855 Bva12g02241 12 17161872 17167855 ECH