Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02238 ATGGGTGTCTCTTTCCTCTCAACTTTCCCTTCTTTGCTTCCTCTTGTTCGTGACTCATCAACCACTACTAATGCTGCTGCCACCAGATACCCCTCTCGCGCAGCACCTATTTGTTGTAATAAAATCGAAATCGATGTTGCTGATGAAGATCGGTTTCATCGGCGAGACATTCTTAAATGCTTTGGTGCGACAATTGGCCTGGAATTAATAGGAAGTTCTGGGTCATTCGTTGGAATGGCTAATGCTGCGGATCTGATACAACGTAGACAGCGTTCTGAGTTTCTTTCCAGTGTTAAGGAAACACTCTACAAAGCCATAAAGGGAAATCCTGATCTTAGTCCATCCATACTAACATTGGCGCTAAATGATGCTTTAACTTATGATAAGGCAACAAAATCAGGTGGCCCAAATGGATCTATACGGTTCAGCTCAGAAATACGTAGACCTGAAAATAAGGGGCTTTCTGCTGCCGTGAATTTATTAGAGGAAGCAAAAAAGGAGATAGATTCATACTCCAAGGGTGGACCAATTTCCTTTGCAGATCTCGTTCAGTTTGCAGCACAAAGTGCTACCAAGGCTACATTTTTAGCATCTGCCATTCGCAAATGTGGTGGAAACGAGCAGAAAGGGAACTTATTATACACTGCATACGGATCAAATGGGCAGTGGGGCTTGTTCGATAGGCAATTTGGTAGGACAGATGCTCAAGACCCAGATCCAGAGGGGAGAGTTCCCATATGGGAGAAAGCAAGTGTTCAGGAGATGAAAGATAAGTTTTCAGCTGTTGGCTTTGGTCCTCGCCAGCTGGCTGTTCTATCTGCATTCTTAGGTCCCGATCAGACTGCAACAGAAACTTTACTGGCCACCGATCCAGATGTTTCTCCATGGGTCCAGAAATACCAAAGGAGCCGAGAGACAGTGTCTCAGACTGATTATGAGGTTGATCTGATAACCACTCTTACAAAAATAAGTACCTTGGGCCAACAAATCAATTATGAGGCATATACATATCCGGTCCCAAAAATCGACATtaccaaactcaaatttta 1049 0.4328 MGVSFLSTFPSLLPLVRDSSTTTNAAATRYPSRAAPICCNKIEIDVADEDRFHRRDILKCFGATIGLELIGSSGSFVGMANAADLIQRRQRSEFLSSVKETLYKAIKGNPDLSPSILTLALNDALTYDKATKSGGPNGSIRFSSEIRRPENKGLSAAVNLLEEAKKEIDSYSKGGPISFADLVQFAAQSATKATFLASAIRKCGGNEQKGNLLYTAYGSNGQWGLFDRQFGRTDAQDPDPEGRVPIWEKASVQEMKDKFSAVGFGPRQLAVLSAFLGPDQTATETLLATDPDVSPWVQKYQRSRETVSQTDYEVDLITTLTKISTLGQQINYEAYTYPVPKIDITKLKF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02238 349 Gene3D - 80 248 - -
Bva12g02238 349 ProSiteProfiles Plant heme peroxidase family profile. 98 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 78 348 IPR044831 GO:0004601|GO:0034599
Bva12g02238 349 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC 78 348 - -
Bva12g02238 349 SUPERFAMILY Heme-dependent peroxidases 83 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 CDD plant_peroxidase_like 96 338 - -
Bva12g02238 349 Pfam Peroxidase 98 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 PRINTS Plant ascorbate peroxidase signature 145 169 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 PRINTS Plant ascorbate peroxidase signature 131 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 PRINTS Plant ascorbate peroxidase signature 273 298 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 PRINTS Plant ascorbate peroxidase signature 113 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02238 349 Gene3D - 249 314 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02238 K00434 - gmx:100795192 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02238 12 17142564 17146895 Bva12g02238 12 17142564 17146895 ECH