Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02230 ATGGCTGTCAACACTAGTCACTCCCTCATTCCTTCCAAATCCTTAGCTTCCGTCCAATTCATTTTACCTTCTTCCAAACCCCACCAATCTTCCTTCCCCAACAACCCCGTTAGACCCAGACGCAGCCCTTCCATTGTAGCTGTACACGCAGCTGAGCCTGCTAAGAATCCCGTCGTCTCCGATAAGCCTTCGAAGCCGCAAACCACATCGACGTCGTCTTCTTCAACACTAGCCACGACGACAACCCGGAATGCAGGTCAGGGAAAATGGACTATTGACAGCTGGAAATCCAAGAAGGCTCTTCAGCTGCCCGAATACCCGAACCAGGAGGAGCTGGAATCGGTTCTTGGGACCCTCGATGCTTTCCCCCCTATCGTGTTCGCAGGAGAGGCCAGGAACTTGGAGGAACGACTGGGTGAGGCTGCCACGGGGAATGCTTTCCTTCTACAAGGTGGAGATTGTGCCGAGAGCTTCAAGGAGTTCAATGCCAATAACATTCGTGACACATTTAGGATTCTTCTCCAGATGAGCGTTGTCATGATGTTCGGAGGACAAATGCCCGTTATCAAGGTGGGACGAATGGCGGGTCAATTTGCAAAACCGAGATCGGAACCGTTCGAAGAGATAAACGGCGTGAAGCTGCCCAGTTACAGAGGAGATAATGTAAATGGGGATTCTTTCGATGAGAAGTCTAGAGTTCCGGATCCACAAAGGATGATTAGAGCATACTGTCAATCTGCAGCCACTCTGAACCTTCTGAGGGCTTTTGCCACCGGAGGTTATGCTGCTATGCAAAGGGTCACCCAGTGGAATTTGGACTTCGCAGAGCACAGCGAACAAGGAGACAgGTACCAAGAGCTTGCTCACCGAGTAGATGAGGCCCTTGGTTTCATGGCTGCCGCTGGGCTCACGGTGGACCATCCTATAATGAAAACAACTGAGTTCTGGACTTCTCACGAATGCTTGCTATTGCCTTATGAACAATCCCTGACAAGGTTGGATTCAACTTCTGGTCTCTACTACGATTGCTCGGCCCATATGGTTTGGGTTGGAGAAAGGACCAGGCAGTTGGATGGTGCTCATGTTGAGTTTTTAAGAGGGGTTGCTAATCCACTGGGAATCAAGGTAAGCGATAAGATGGATCCAAGTGAGCTGGTTAAACTCATTGAGATTTTGAATCCCCAGAACAAGCCGGGGAGAATAACTGTGATCACGAGGATGGGAGCTGAAAATATGAGAGTGAAGCTTCCACATCTAATCAGGGCAGTTCGCAGAGCAGGGCAAATTGTCACATGGGTCAGCGATCCTATGCATGGAAACACCATAAAAGCTCCTTGCGGCCTCAAAACTCGCCCTTTCGATTCCATTCGGGCGGAGGTGAGAGCCTTCTTCGATGTGCACGAACAAGAAGGAAGCCACCCAGGTGGAGTTCATTTGGAGATGACAGGTCAGAATGTGACTGAGTGCATTGGTGGGTCAAGGACTGTCACTTTTGATGATCTGAGCTCACGTTATCACACACACTGTGACCCTAGGCTCAATGCTTCACAATCTCTTGAGCTTGCCTTCATCATTGCCGAAAGGCTCAGAAAGAGCAGGATCAGCTCTAACAAGTCTCCTGCTTCTCTAAGCCTGTA 1637 0.4979 MAVNTSHSLIPSKSLASVQFILPSSKPHQSSFPNNPVRPRRSPSIVAVHAAEPAKNPVVSDKPSKPQTTSTSSSSTLATTTTRNAGQGKWTIDSWKSKKALQLPEYPNQEELESVLGTLDAFPPIVFAGEARNLEERLGEAATGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEPFEEINGVKLPSYRGDNVNGDSFDEKSRVPDPQRMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRISSNKSPASLSL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02230 545 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 90 532 IPR002480 GO:0003849|GO:0009073
Bva12g02230 545 MobiDBLite consensus disorder prediction 24 88 - -
Bva12g02230 545 Gene3D Aldolase class I 278 531 IPR013785 -
Bva12g02230 545 SUPERFAMILY Aldolase 82 530 - -
Bva12g02230 545 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 5 539 - -
Bva12g02230 545 MobiDBLite consensus disorder prediction 24 38 - -
Bva12g02230 545 Pfam Class-II DAHP synthetase family 90 526 IPR002480 GO:0003849|GO:0009073
Bva12g02230 545 MobiDBLite consensus disorder prediction 61 88 - -
Bva12g02230 545 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 5 539 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02230 Bva-Chr12 17108799 17112574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02230 K01626 - zju:107420757 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02230 12 17108799 17112574 Bva06g02705 06 17036325 17039809 BWGD
Bva12g02230 12 17108799 17112574 Bva12g02230 12 17108799 17112574 ECH