Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02228 ATGGAACCTCATGATCACCAGCAACACTGCCCAAAATCTCCTCAAACTACATCTCTGCCTCCAACCACCGGCACTACCTTCGCACCACCGCCACCGTCACCATCGTGGTCTGAAATTTCACCTCCTCCCACTGATCGACCCATCAGAGCCCCGGCTATCCCTCCAGATACCAACTCCCAACGAGCCATCATTCTTGCCCCGGTCCCACAAGCGCAGAAAGTCTCAGTGGTTTCCCCTCCTTATCATTTCCAAACCCCATCGAAGAAAATTCATTCCCCCGATGATATTCGCCGCTTTCACGAATCCGATTCTGGAAGGAACTTCCTGGGCTTCGTCGTAGCTCTCTCAGAATCCATTCGTGGCCACAAAATTTCGGACCCTTGTTATCAATCTGAAACCGTCAGCCGTATCATCTCAATTCTCGATTCCCTAATTCAATGGGTCGAAGAAATCCCACCGGAGCAGCAAGCTGCCCGCTACGGTAACGCCGCCTACAGAACCTGGCACAGTCGATTGGTCGAAAGTAGCGAGTCCTTGATGCTCCGCTTCCTTCCTCATCATCTCCATTCAGCAACCATCGAGATTGTTCCTTATTTCACTGATAGTTTTGGAAATTCTAGCCGAATCGATTACGGTACTGGTCATGAGACTAATTTTGCTGCCTGGCTATATTGCCTTGCGAGATTGGGGCTGATCAAAGAGGAAGATTACCCAGCTGCGGTGGCCAGAATCTTTGTCAAGTATCTAGAACTGATGAGAAAGTTACAGTTGGTTTATTCCTTGGAGCCTGCAGGATCGCACGGAGTTTGGGGTCTCGATGACTACCACTTTCTTCCGTTTATATTTGGGTCATCCCAGTTGATCGACCACAAGTATATGAAACCCAAGTCGATTCATAATGAGGATATACTGGATAATTTCTCCAATGAGTATCTCTACCTTTCCTGCGTTGCTTTTATTAAGAAGGTGAAGAAGGGTTTGTTTGCGGAGCATTCACCGATGTTGGATGATATCAGTGGGGTTCCGAACTGGAACAAGGTAAATTCTGGGTTACTGAAGATGTACAAGGCGGAGGTCTTGGAGAAGGTTCCTATAATGCAGCATTTTCTTTTCGGCTGGCTTATTAAGTGGGAGTA 1136 0.478 MEPHDHQQHCPKSPQTTSLPPTTGTTFAPPPPSPSWSEISPPPTDRPIRAPAIPPDTNSQRAIILAPVPQAQKVSVVSPPYHFQTPSKKIHSPDDIRRFHESDSGRNFLGFVVALSESIRGHKISDPCYQSETVSRIISILDSLIQWVEEIPPEQQAARYGNAAYRTWHSRLVESSESLMLRFLPHHLHSATIEIVPYFTDSFGNSSRIDYGTGHETNFAAWLYCLARLGLIKEEDYPAAVARIFVKYLELMRKLQLVYSLEPAGSHGVWGLDDYHFLPFIFGSSQLIDHKYMKPKSIHNEDILDNFSNEYLYLSCVAFIKKVKKGLFAEHSPMLDDISGVPNWNKVNSGLLKMYKAEVLEKVPIMQHFLFGWLIKWE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02228 378 MobiDBLite consensus disorder prediction 24 50 - -
Bva12g02228 378 MobiDBLite consensus disorder prediction 1 56 - -
Bva12g02228 378 Pfam Phosphotyrosyl phosphate activator (PTPA) protein 86 377 IPR004327 GO:0019211
Bva12g02228 378 CDD PTPA 108 372 IPR004327 GO:0019211
Bva12g02228 378 SUPERFAMILY PTPA-like 78 377 IPR037218 GO:0019211
Bva12g02228 378 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B 62 378 IPR004327 GO:0019211
Bva12g02228 378 PIRSF PTPA 74 378 IPR004327 GO:0019211
Bva12g02228 378 Gene3D - 272 378 IPR043170 -
Bva12g02228 378 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A ACTIVATOR 62 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02228 Bva-Chr12 17098023 17100421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02228 K17605 - zju:107420767 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02228 12 17098023 17100421 Bva12g02228 12 17098023 17100421 ECH