Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02224 ATGGGTTCCCTGGGCATTGTAGAGAGACCACATGCAGTTTGCATACCGTACCCAGCTCAAGGTCACATAAACCCAATGCTCAAACTAGCAAAGCTCCTCCGCTTCAAAGGTTTCCACATCACCTTTGTTAACACAGAATACAACCACAAACGCCTTCTCAAGTCTCGAGGCCCGGATTCCCTCAACGGGCTTCCTTCCTTCCGTTTCGAAACCATCCCCGATGGTCTACTCGAGACCGATGTGGATGTCACTCAGGATATACCTACCCTCTGTGAATCCACCAGAAAAACTTGCTTGCCTCACTTCAGACACCTGCTTTCCCAACTCAACGACGCCCCAGATGTCCCTCCTGTGACTTGCATAATTTCTGATGGCGTCATGAGCTTCACTCTTGACGCTGCAAAAGAACTGGACGTTCCAGAAGTGCTTTTCTGGACCACCAGTGCTTGTGGATTCTTGGGTTACCTTCATTATCGCAATCTCATCGACGAGGGCATAACACCCCTCAAAGATTCTAGTTATTTGACAAATGGGTACTTAGATACCGTCATAGACTGGATACCAGGCATGAAAGATATACGATTGAAAGATCTTCCTAGCTTCCTCAGAACAACTGACCCAAATGACCTTATGCTAGACTTCATCTTGCATGAATGCGAAAGAGCTAAGAGAGCTTCTGCCATTATTTTGAATACGTTTGATGCCTTGGAGCATGACGTTTTGGAAGCAGTTTCGTCTGTCTTGCCCCCTGTTTATTCCATCGGTCCCTTGAATTTGCTCGTGAACCATGTCTCTGATAAAGACTTGAAATCAATTGGGTCCAACCTCTGGAAAGAGGAGGCAGAATGTCTTGAATGGCTCGACTCCAAGGAGCCCAACTCTGTGGTTTACGTAAACTTTGGAAGCATCACAGTTATGACAAGTGAACAGTTGATTGAGTTTGCTTGGGGCTTAGCTGAGAGCCAAAAGACTTTTCTTTGGGTCATTAGACCAGATCTTGTCGCCGGTGACGCGGCAGTTCTTCCTCCAGAGTTTGTAAGAGAGACCAAAAACAGAGGCCTTTTGTCAAATTGGTGTCCTCAAGAACAAGTGCTAGCTCACCCAGCAATTGGAGGGTTCTTGACACACAGTGGTTGGAACTCAACAATTGAAAGTGTGTGCAGTGGGGTCCCCATGATATGTTGGCCCTTCTTCGCCGAACAACAAACCAACTGCAGGTTCAGTTGCCAGGAATGGGGCATTGGTTTGGAGATAGATAACGATGTAAAGAGGGAGGGAGTTGAGAAGCTTGTGAGGGAGTTGATGGATGGGGAAAAGGGCaaagaaatgagaaacaaTGCCTTGGAGTGGAAGAAATTGGCAGAGGATGCTGCTTCTGCGTCAGATGGTTCATCCTATCTCAATTTGGATAACTTGGTTCGTCAAGTTCTTCTGGCTAAAACTGCAAAAGATTA 1454 0.4622 MGSLGIVERPHAVCIPYPAQGHINPMLKLAKLLRFKGFHITFVNTEYNHKRLLKSRGPDSLNGLPSFRFETIPDGLLETDVDVTQDIPTLCESTRKTCLPHFRHLLSQLNDAPDVPPVTCIISDGVMSFTLDAAKELDVPEVLFWTTSACGFLGYLHYRNLIDEGITPLKDSSYLTNGYLDTVIDWIPGMKDIRLKDLPSFLRTTDPNDLMLDFILHECERAKRASAIILNTFDALEHDVLEAVSSVLPPVYSIGPLNLLVNHVSDKDLKSIGSNLWKEEAECLEWLDSKEPNSVVYVNFGSITVMTSEQLIEFAWGLAESQKTFLWVIRPDLVAGDAAVLPPEFVRETKNRGLLSNWCPQEQVLAHPAIGGFLTHSGWNSTIESVCSGVPMICWPFFAEQQTNCRFSCQEWGIGLEIDNDVKREGVEKLVRELMDGEKGKEMRNNALEWKKLAEDAASASDGSSYLNLDNLVRQVLLAKTAKD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02224 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 474 - -
Bva12g02224 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 209 442 IPR002213 GO:0008194
Bva12g02224 484 ProSitePatterns UDP-glycosyltransferases signature. 358 401 IPR035595 -
Bva12g02224 484 PANTHER GLYCOSYLTRANSFERASE 55 477 - -
Bva12g02224 484 Gene3D Glycogen Phosphorylase B; 278 456 - -
Bva12g02224 484 PANTHER GLYCOSYLTRANSFERASE 6 56 - -
Bva12g02224 484 CDD GT1_Gtf-like 10 461 IPR002213 GO:0008194
Bva12g02224 484 Gene3D Glycogen Phosphorylase B; 11 460 - -
Bva12g02224 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 55 477 - -
Bva12g02224 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02224 Bva-Chr12 17082853 17084672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02224 8 480 Glycosyltransferase AT1G22380 65.263 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02224 - - gmx:100790111 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02224 12 17082853 17084672 Bva12g02224 12 17082853 17084672 ECH