Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02220 ATGGCTTGGcgcttcttcttcctcaccaACATCTCCAAGATCAAACCTTTCAGAACCCTAACCCTGCCTCTCACTGCGGCACAATGTCATCCCGTCAGCCCTAATTCTAATCCGGTTAAACCCTACTTTTCCCTCCTCACTTCCCCATTCTCCACCTCCTTCCTTGTCACCAAAACCCCAAAAAAGCTCAAGAAGAAACGCAAAAAGCAAGAGAGCCCTCGAACCAAGCTCGTTCAAACCAAAGCCGATCGTATCCCACACTTTGAACGCATCGTCGAGCGCGACAGCCTTTTCAAGTTTCTTATCAGGTCCAAGCAATTCCTCTCCAAGGAAAACGAACATGTCCTTCGCCTCGACGATGCTGGCAAGCTCTACCATGAGCTTGGATTTCCCCGTGGCCGCAAGGTTTCCCGCTCAATCGAGCGCCATCCTCTGATATTCGAGACATACAGGCACATTGATGGGAAAATGTGGTTTGGGTTTACTGATTTTATGGAAGAGTTGCTTTTAGAGGAGCAAGCAATCATGGATTCCATGGAGATCGACCGTGTCAATAAAGTTCGCAAATTGCTGATGATGTCTGCTAATAAACGCATTCCCTTGAGTAAAATTCATCATTGCAGAAGGTTGTTTGGAATTCCGGATGATTTCAGAGACAGAGTTGGTAAGTACccaaattatttcaaaactgTAGTTGAAAGTGATGGGAAGAGGATACTTGAATTGGTGAATTGGGATCCATTATTGGCAGTGAGTGCGCTTGAGAGTGAGTTCATGGTTGATGAGGATAGAGCTAAGAGGGCTTTTAAGTTTCCCGTGAAACATGGGaaggatttggatttggatgtGGACGATAGAAGGAAGCTCAATTTGTTGAATACGCTTCCCTTGGTGTCACCATATTCAGATGGATCGAAATTAGATGTTTGGACTCTGGAAGCAGAGAAACACAGGGTAGGGGTTATTCATGAATTCTTGAACTTAACATTGGAAAAAAGGGCCTCTATTCATCATATTGTGGAATTTAAGGAAGAATTTAGTTTGACTAAGCATACTTATCATATGCTTTTGAAGCAGCCCAGAACATTTTATTTGGCAGGAACAGAGATGAACTGGGTTGTGTTCTTGAAGGACGcttatgatgaaaatggtgttTTAATTAAGAAGGATCCGCAGGTGCTCTTCGATGAGAAGCTCTATAAGTATGCTCAAATGCAGGAGACGGGGCCGTCCTCCGATATTTA 1244 0.4172 MAWRFFFLTNISKIKPFRTLTLPLTAAQCHPVSPNSNPVKPYFSLLTSPFSTSFLVTKTPKKLKKKRKKQESPRTKLVQTKADRIPHFERIVERDSLFKFLIRSKQFLSKENEHVLRLDDAGKLYHELGFPRGRKVSRSIERHPLIFETYRHIDGKMWFGFTDFMEELLLEEQAIMDSMEIDRVNKVRKLLMMSANKRIPLSKIHHCRRLFGIPDDFRDRVGKYPNYFKTVVESDGKRILELVNWDPLLAVSALESEFMVDEDRAKRAFKFPVKHGKDLDLDVDDRRKLNLLNTLPLVSPYSDGSKLDVWTLEAEKHRVGVIHEFLNLTLEKRASIHHIVEFKEEFSLTKHTYHMLLKQPRTFYLAGTEMNWVVFLKDAYDENGVLIKKDPQVLFDEKLYKYAQMQETGPSSDI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02220 414 Pfam Plant organelle RNA recognition domain 84 407 IPR021099 GO:0003723
Bva12g02220 414 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 31 411 IPR045040 GO:0003723
Bva12g02220 414 PANTHER OS09G0473400 PROTEIN 31 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02220 Bva-Chr12 17057658 17059238 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02220 - - jre:109007321 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02220 12 17057658 17059238 Bva12g02220 12 17057658 17059238 ECH