Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02218 ATGGCCACGCTGGACTCCTCCACCGACCCTAACCATCTCCACGTCGATTCTCTTTCACTCATCGACCTTCGTCTTCTCTCTCAATCCGAACTCTACTCCATGTCCCTTCGCTCCTCCTCGTCCGCCGCCTATCATCTTCACCGCCGTTCCGATGACGATGCCATAATCCCCAAAATTGACCGTTCCGTCTTTAATGAATCCGCCGGTAGCCGTAAACAGACCTTCTCTCGCCTCCACCTCGCCCCTCGCGACAACCAAATCGCCAATGCATCCTCTTCCATCACTGGCATTCCCCTCCAGAATCCCGAGCCCGTAGACGAAGAACATGCCCAAATAATTGGCTTACTTCAGCAACTCTTCGGCGTCGAGTCTTTCTGCGACGAGACGAACGACGACGGTTCCCTTTTCCCTGTCCAGATTGAATTTAGAGACCCTTTACCGGAGTCTGCGACCATAGCCTTCCAGAACATTCCAATTGATGTCGTTGATGGTGCTCCGAGAAAGCGAAAGCGTGGGCGGCCACGAAAGAATGAGATTCCGGGAGTACGTGTGGAGGAGAAGGCAATAAAGGGGAAGGAGGAGGACCGTTTGGCGATGACAATGGTAAATAACCATAGTGTTCCGGTGGAAGCAACTGCTTTGGTTAATTTTGAGGATCCATTTGGGGAGGAGATAAACAGGAGGACACAAGGATTGGTGACAGAATCTCAATTGTTGGAATTCCTGGGAACCTTGAATGGAGAATGGGTGAgtcagaggaagaagaggaagattgTGCTGGCTAGTGACTTCGGTGGCCTGTTGCCCAGTGGTTGGAAGATCATGCTTTCACTAAAGAGGAGAGCAGGTCGCGTATGGATATTTTGTCGCCGTTACATAAGTCCTGATGGTCACCAGTTTGTGTCTTGCAAGGAAGTTTCTTCATacttgctttcattttttggaCTTCAAGACGTAAGCCAATCGAAATCTTGTCATACCGATGGCAATCTTCAAGTGTCCAGTAAAATGACTTCTGAAAATCAGCACAACGGTTGTGTCCCTAAAACAGGCATGAAGTCTGATGGTGTTGCCAGTAGTTCGCACATACCTTGTACCTCTATATGTATTGATCTTGAGAGGCAGGCTACTGTAGCTGCATCAATTGGAAGTGAGAAGCAAAGTACTTTTAATGAAATTGTAAATGATTATCTGGCTTCAAAggttaaaataagaaatactGCTAGTGGGAATGTTACAGACTTAAATTGTGAGGCAAGTTTGTTGTCTGAAGATCATCAGACCTTGGATGGGGATAAGAATGATACAAACTCGGTTCTTGGACCTTTTTCTGAGGTGGGTATAGATTGTAAGTTACATAATGAGAGGTTTGTTGATGTTAACAGGGCTGATGATATTTCTTTGGTTATCCCAATTTCTTTCTCCAACAATAAAAGTACTGGTAGTTATGAATGTTCTGATGAAACAAATGGTATCAAATGCATAAAAGatggaataaataattttgttagtcAGGATGTAAATGTTGCTTGCTATGAAACTGTTACATGTGTAAATGAGCAAGCATGTTTGGGGGAAAATAGTGGGCATGGGCCATCTTCAAGATCAGTGGAGGACTCCAGACACCAGATAGGGAAAAAATGTTCTGGTAGCAGCATAGAGGATGGACATCTCATTACCTCACTGGAAGACATGAAGATTAGTGATCAAAAACGATTTGAGGATGAAAGGGGGCGAATTATTTCTGGAAATTGTCActctgaaacaaaaaaagtatcATCCAGGGCTGAAGTGATAAGTTGTTCTCAAGGCAGTTCGATTGTCCCATCTCAGAATGAACTTGAATGTGCTTCTGTAAATAGTAAGAATGGGGTActgacttccatgaccactgATTCTGCTGGGGGAAAATGTTCTGATAATGGTTTATCTAATTCATCTACCGATGAGAGAACATGTGCTGCCAGCAACAACGTCAATAGTGTTTCTTGCACTAGCACTCAAGATGTGTCCAAATTTGGCGGAATAGATGTTGCTCCTAATGTCAAAGCAACTGTGGATTTCGGTGATAATCACGCCACTCAAAATGACTATGTTGTGACAAGTTGTACGCAGGAAAGGAGTTCCCTGAATGAGAAAAGTTTCAATATTGAATTGGAAAATCCATCACACGGAAGTTCTGAAGAAAATTTACTTATCCCTACTGGCAATCTGCATCCTAATGTATTTGATGATCAAAACCATGGAGATTCAGGTGCAGATGTGCAGACAAAGAAAACATCTATTGTATATTCTCAATCTACTATCAAGGATGGTATCCTCAATGAGACATTGCTTGAAGGCagcattattttgttgttagatTCAGCAAGTTGTGCAGGTGGCTTTTCTGTTATAGAGTTCGTTGTTGCAACTCTGGTATG 2423 0.4139 MATLDSSTDPNHLHVDSLSLIDLRLLSQSELYSMSLRSSSSAAYHLHRRSDDDAIIPKIDRSVFNESAGSRKQTFSRLHLAPRDNQIANASSSITGIPLQNPEPVDEEHAQIIGLLQQLFGVESFCDETNDDGSLFPVQIEFRDPLPESATIAFQNIPIDVVDGAPRKRKRGRPRKNEIPGVRVEEKAIKGKEEDRLAMTMVNNHSVPVEATALVNFEDPFGEEINRRTQGLVTESQLLEFLGTLNGEWVSQRKKRKIVLASDFGGLLPSGWKIMLSLKRRAGRVWIFCRRYISPDGHQFVSCKEVSSYLLSFFGLQDVSQSKSCHTDGNLQVSSKMTSENHNGCVPKTGMKSDGVASSSHIPCTSICIDLERQATVAASIGSEKQSTFNEIVNDYLASKVKIRNTASGNVTDLNCEASLLSEDHQTLDGDKNDTNSVLGPFSEVGIDCKLHNERFVDVNRADDISLVIPISFSNNKSTGSYECSDETNGIKCIKDGINNFVSQDVNVACYETVTCVNEQACLGENSGHGPSSRSVEDSRHQIGKKCSGSSIEDGHLITSLEDMKISDQKRFEDERGRIISGNCHSETKKVSSRAEVISCSQGSSIVPSQNELECASVNSKNGVLTSMTTDSAGGKCSDNGLSNSSTDERTCAASNNVNSVSCTSTQDVSKFGGIDVAPNVKATVDFGDNHATQNDYVVTSCTQERSSLNEKSFNIELENPSHGSSEENLLIPTGNLHPNVFDDQNHGDSGADVQTKKTSIVYSQSTIKDGILNETLLEGSIILLLDSASCAGGFSVIEFVVATLV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02218 806 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 6 385 - -
Bva12g02218 806 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 258 334 IPR001739 GO:0003677
Bva12g02218 806 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 6 385 IPR037472 -
Bva12g02218 806 SUPERFAMILY DNA-binding domain 265 313 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02218 Bva-Chr12 17046576 17051969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02218 - - gmx:100780637 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02218 12 17046576 17051969 Bva12g02218 12 17046576 17051969 ECH