Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02209 ATGTCGCCGTCCTACGACGGCTACTGCTCATGCTGTTCCGCCGAGAATAATGGTTctcatgatgatgatgatagaTCGATTGTTGCAAATTGTACTCATTCTAGAAAGTTCGGAGGCTCTTCTCCGTCGTTCCCCTGCTCTACCCCCTTGTTAAGTCTTGATTCGATTCCATTGAAGGACTGGGAGAAGCTGAGGAGAATTGTTATGGCCTCAGCTAAGGGCTTCACAATTGGTGCTGGTATCAAGGGTGGCCTAGCTTTCTTCTCTATCTTAGCTGGACTGAAACGAAGAAAATCGCCAAGCTCTCTCAGAAAGGGGGTTGTATTAACAAACAGTGAAGCAATCGTTTTGGCTGTAAAGGAAACATTGAGATATGGTCTCTTTCTTGGAACCTATGCTGGAACATTCGTGTCCATGGATGAGCTTATAGGAGCTTTGGGCGGTCACCGTAGGACAGCGAGATGGAGGGCTCTATTGGCAGGGGCAATTGCTGGCCCGTCGATACTTCTGACTGGCTTAGGGACGCAGCATACAAGTTTGGCCATTTACATACTCATGCGTGCTGCTGTTTTGGCATCTCGTTGTGGGATTAAGAGCAAACGATTCGGGAAAATTTGTAAACCTCTCACATGGAAGCACGGTGACATATTTCTCATGTGCCTCTCCTCTTCCCAAATATTGTCGGCTTACATATTAAAGCAAGAGAGTTTTCCTCCCTCATACAAGTCCTTTCTCAATAAACATGGTGGAAAGGATATCGTAATCCTGCAAGGGGTAAAAGACATAGCAAGTGGCAAGCCTTTATCTAATTTGGAAGCGATAGAGAAATACTACAAAACTAGGGGTGTCAATGTGACACTAGATCCAAACATGAAAGTCCCTTGCTCGATTGTACATGGGAATCAGTCATGTACTAGGcatgttgtttcttttctccttcaagcCTACAAAAGAGCATTTCCTGTTTATCTTCCAGTTTATCTTATCCCAGCACTAATAGTTCACCGACAAGGGCTTTTAAAGAGGCCTTACACAATATTAGCAAAGGGTGCAGTTGGCACTGCAAGATCAAGCTTGTTTCTGTCTATGTACTGCACGTCTGCCTGGATGTGGACGTGCTTTCTCTTCTGGATTTTCAAAAGATGTAACGTTCCACTGTTGGCCATGGGAACGTTCCCAGCTGGCCTCGCATTAGTAATCGAGAAGAAAAGCAGGCGAATGGAGTTATCTTTGTACTGCCTTGCGCGGGCTATTGAGAGCTTCTTCACTTGCATGGCTGACGCAGGATACATGCCTCGGTCCAAAACGATGAAGAGAGCTGATGTGTTGATTTTCAGCGTATCAACAGCCATCATTATGCACTGCTATGCGCAGGAAAGGGAAGTATTTCGATCTAAATATTTGAACGTCCTTGATTGGGTATTTGGTGTACCTCCTCCTCCATGTGAAACCCCGAGATGTAAAGATACGTA 1472 0.4402 MSPSYDGYCSCCSAENNGSHDDDDRSIVANCTHSRKFGGSSPSFPCSTPLLSLDSIPLKDWEKLRRIVMASAKGFTIGAGIKGGLAFFSILAGLKRRKSPSSLRKGVVLTNSEAIVLAVKETLRYGLFLGTYAGTFVSMDELIGALGGHRRTARWRALLAGAIAGPSILLTGLGTQHTSLAIYILMRAAVLASRCGIKSKRFGKICKPLTWKHGDIFLMCLSSSQILSAYILKQESFPPSYKSFLNKHGGKDIVILQGVKDIASGKPLSNLEAIEKYYKTRGVNVTLDPNMKVPCSIVHGNQSCTRHVVSFLLQAYKRAFPVYLPVYLIPALIVHRQGLLKRPYTILAKGAVGTARSSLFLSMYCTSAWMWTCFLFWIFKRCNVPLLAMGTFPAGLALVIEKKSRRMELSLYCLARAIESFFTCMADAGYMPRSKTMKRADVLIFSVSTAIIMHCYAQEREVFRSKYLNVLDWVFGVPPPPCETPRCKDT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02209 490 PANTHER BNAANNG02190D PROTEIN 9 483 - -
Bva12g02209 490 PANTHER UNCHARACTERIZED 9 483 IPR026749 -
Bva12g02209 490 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 303 423 IPR031926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02209 Bva-Chr12 17002529 17007087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02209 - - tcc:18592157 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02209 12 17002529 17007087 Bva12g02209 12 17002529 17007087 ECH