Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02206 ATGGATTTCGAAGAAACCAAAAGCTACAGATGCAAAGTGAACCTCAAGCCTCGTTCTATCAAACCGGTTGTCGGCTGTGAAATCAATCCGGTTGTCTCAATCAGAGCAGAAGGGCACTTTGCAACCTCTTCATATTCTCTCAATTTCAAATGGTACAAGGAGCAATCAGAGCCAAAGGTCTGTTCCACGCACCGTGATAAGTTGGCTACTCTTCAATGCATCTCTTGTGTTAAACTGAAGATCCCAGCAAAAGATAGTTACTATTGCTCAACGAAAtgcttcataaattcatgGAAAACACATCTGCAGCGCCATCAttataaaactgaaaaaatcAAGGAGACTTCAACTGATGATAAACAAACGGTAAGAAAGATTAGGAGTTGTGGCTCATGGCCAGAGTTCAGTAGTGAATTTTTAATTGGGGAGAGAGCAGTTGCGgaagaaggaaataaatgGATTTTGGTGGGttgttcaaaaaattatgtaccAAAAATCGATGATCTTGGATTAAATTTGAAGCTGGAATGCGTAGCTGTTGACATTTTAACAGATACTGCTTTGTCTGAAATGAGTGTTATTGTGACTGATCATGTAATGGAATTTCCACTGGCTAAACCTCGCCGTATGGTCCAAATCCGGCATCAGCATGAATATTCAAATCTGTGTTCCTCATCCTTTAATGGTATTACTTTTAGCATACTCTCCTATAACATCCTGTCCGATCTGTACACTGTTAGAAGATATCGCCACTGCCCACAATGGGCTCTTGCATGGGAATACCGTCGTCAAAATTTGCTTCGTGAGATTATTGATTATGATGCAGATATCATTTGTCTTCAAGAGATGCAAAGTGACCATTTTGAAAGTTTCCTCAAACCAGAGTTGACAAAAAAGGGATATTTGGCTATATACAAGAAAAGAACCAATGAGGTTTACACTGCTAATCAGTATGTAACAGACGGGTGTGCAACTTTCTATCAGTGCGATCTGTTTAAAGAAGTTATGAAATATGAGattgaatttaataagaaaacatcACCTGTGGTTGAAGCACTGAAACCTGAGCTAAGGAATGAAGCTAGCATCCGCCTCAAGAAGGATAATGTTGCGCTTGTTGTCATTTTAGAAACACTGGAAAGTTGCCACACTTATGATGCCTTTCGATCTAGCGTTTGTGTGGTAAACACCCACATATGTTCAAGTCCAGAACTCCCggatgtaaaattatttcagGTGGTCACACTTATCAGTGAATTGGAGAAAATTCTGCCATCAGAAATTCCTCTATTGATTTGTGGGGATTTCAACTCTGTTCCTCAAAGTGATCCCCACACATACATAGTAACTAGCAAACTAGAACATACGGAATCTGTTGACCCACATGGTATATATCAGCATCTCAAGCTCGATCATCGATTTTCTATGGGGAGTGCATATGCAAAGCTTGGTCTAGCAATTGCAGCTCAGGAGAGACAGTTGGGGAGGTTTAACCTAGAAACCAGGGAGCCAACATTCACCTACTCCGCGCGAGGATTCTCAGGAACCttagattatattttctttacagTGAACAATTTGGAGGTTGAAGGTCTCTTGGAGCTTCTGGACCACAAAGATGTGGCTGCTGGTCTTCCCTCACCCCTCTGGTCATCTGACCATATCGCCCTCATGGCAAGCTTCAGAATTCCTACCCAGAAGCTAACAACAGCCCTTACACACAGCTGTTTACAGTATTTACAAAACCATGAGTATTGGTG 1760 0.3909 MDFEETKSYRCKVNLKPRSIKPVVGCEINPVVSIRAEGHFATSSYSLNFKWYKEQSEPKVCSTHRDKLATLQCISCVKLKIPAKDSYYCSTKCFINSWKTHLQRHHYKTEKIKETSTDDKQTVRKIRSCGSWPEFSSEFLIGERAVAEEGNKWILVGCSKNYVPKIDDLGLNLKLECVAVDILTDTALSEMSVIVTDHVMEFPLAKPRRMVQIRHQHEYSNLCSSSFNGITFSILSYNILSDLYTVRRYRHCPQWALAWEYRRQNLLREIIDYDADIICLQEMQSDHFESFLKPELTKKGYLAIYKKRTNEVYTANQYVTDGCATFYQCDLFKEVMKYEIEFNKKTSPVVEALKPELRNEASIRLKKDNVALVVILETLESCHTYDAFRSSVCVVNTHICSSPELPDVKLFQVVTLISELEKILPSEIPLLICGDFNSVPQSDPHTYIVTSKLEHTESVDPHGIYQHLKLDHRFSMGSAYAKLGLAIAAQERQLGRFNLETREPTFTYSARGFSGTLDYIFFTGLLELLDHKDVAAGLPSPLWSSDHIALMASFRIPTQKLTTALTHSCLQYLQNHEYW 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02206 579 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 44 561 - -
Bva12g02206 579 Gene3D Endonuclease/exonuclease/phosphatase 200 568 IPR036691 -
Bva12g02206 579 Pfam Endonuclease/Exonuclease/phosphatase family 235 547 IPR005135 GO:0003824
Bva12g02206 579 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE ISOFORM X1 44 561 - -
Bva12g02206 579 SUPERFAMILY DNase I-like 230 556 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02206 Bva-Chr12 16993286 17001785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02206 233 448 EF-hand Containing Proteins AT5G54130 25.652 4.58e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02206 K12603 - tcc:18592162 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02206 12 16993286 17001785 Bva12g02206 12 16993286 17001785 ECH