Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02197 atgatgaagcCAGAGACTTTGACGCTGGTGCTTGTGAATCTGGCAGGAATTATGGAGAGAGCTGACGAATCTATGTTGCCGGGTGTGTACAGGGAAGTAGGTGCAGCCCTTCACGCCGACCCAACTGGACTCGGTTCCCTTACTCTCTTTCGATCTATAGTGCAGTCCTCTTGTTATCCCATCGCCGCCTACCTCGCCGTCCGCCACAATCGAGCACATGTTATAGCACTTGGGGCTTTTCTCTGGGCAGCCGCTACTTTCCTCGTTGCTTTCTCCTCCACTTTCTTCCAGGTGGCTGTGTCACGAGCATTAAATGGAATCGGCCTTGGACTAGTTGCACCTGCAATCCAGTCCCTTGTTGCTGACTCAACTGATGATAGCAATCGTGGCACGGCTTTTGGATGGCTTCAACTTACAGCGAATCTCGGTTCAATTACGGGTGGCCTCTTATCAGTGTTAATAGCCCCTATAACATTCATGGGTATACCTGGTTGGAGAATATCCTTTCACATTGTTGGTCTAATAAGTGTTATTGTAGGTATTTTAGTATACCTCTTTGCCAACGATCCACACTTCCCAAAAAATGGCACAAATGACAGCAATCAAGTtccaaataaaacattttggtCTGACGTGAAAGATCTGTTTCAGGAAGCCAAGTCAGTTTCTAAGATTTTGTCTTTCCAGATAATTGTTGCACAAGGTGTCACTGGTTCCTTCCCCTGGTCAGCTTTGTCTTTTGCAGCAATGTGGTTAGAGCTTGCTGGCTTCTCCCACACAGAAACTGCATTCCTTATGGGCTTGTTTGTGATTGCCAATTCCGTCGGGGGTTTGTTTGGAGGTAAGATCGGGGATATCCTCTCCACCCGTCTTCCAAATTCTGGGAGGATAATCCTAGCTCAGATAAGCTCTGGATCAGCAGTTCCCCTAGCAGCAATACTTCTTCTGGGTTTACCAGATGATCCACCCAAAGCAACACCCTATGGTTTGGCTCTGATTATTGTGGGTTTCTTCATATCTTGGAATGCTCCAGCTACAAACAATCCAATTTTTGCAGAAATAGTCCCTGAGAGATCCAGAACAAGTGTATATGCGTTGGACCGATCATTTGAGTCTATTCTATCATCTTTTGCTCCCCCAGCAGTTGGACTTTTGGCTCAGCATGTTTATGGTTATAATAAGCCAATTCCTGAAGGATCTAGTAAATATGAAGAGATTTCAACGGACAGAGAAAATGCTGCATCATTGGCTAAAGCACTATATACAGCAATAGGAATTCCAATGGCTCTCTGCTGTTTCATCTACTCATTTCTTTATCGCACCTATCCAAGGGACAGGGAACGAGCTCGAATGGAAAAATTGATAGAGTCAGAGATGAAGCAGATAGAATCTGACGGTTTAGCCGTGGGTTCAGAGTTCAATCAGGTCCAGTTGTCTGAGTCAGAAGAGTTGTACGTAAGAGATTATGATGGTGATGCTGTTGATCTTGATGATGAAGAGAACGTATTGCTTTACCGGCAGTTGACATTTGCCAATTTAGGTGAATA 1547 0.4428 MMKPETLTLVLVNLAGIMERADESMLPGVYREVGAALHADPTGLGSLTLFRSIVQSSCYPIAAYLAVRHNRAHVIALGAFLWAAATFLVAFSSTFFQVAVSRALNGIGLGLVAPAIQSLVADSTDDSNRGTAFGWLQLTANLGSITGGLLSVLIAPITFMGIPGWRISFHIVGLISVIVGILVYLFANDPHFPKNGTNDSNQVPNKTFWSDVKDLFQEAKSVSKILSFQIIVAQGVTGSFPWSALSFAAMWLELAGFSHTETAFLMGLFVIANSVGGLFGGKIGDILSTRLPNSGRIILAQISSGSAVPLAAILLLGLPDDPPKATPYGLALIIVGFFISWNAPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGLLAQHVYGYNKPIPEGSSKYEEISTDRENAASLAKALYTAIGIPMALCCFIYSFLYRTYPRDRERARMEKLIESEMKQIESDGLAVGSEFNQVQLSESEELYVRDYDGDAVDLDDEENVLLYRQLTFANLGE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02197 515 PANTHER SPINSTER 2 489 IPR044770 -
Bva12g02197 515 CDD MFS_spinster_like 9 435 IPR044770 -
Bva12g02197 515 Gene3D MFS general substrate transporter like domains 5 194 IPR036259 -
Bva12g02197 515 Gene3D MFS general substrate transporter like domains 225 453 IPR036259 -
Bva12g02197 515 Pfam Major Facilitator Superfamily 14 344 IPR011701 GO:0022857|GO:0055085
Bva12g02197 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 8 443 IPR020846 GO:0022857
Bva12g02197 515 SUPERFAMILY MFS general substrate transporter 7 448 IPR036259 -
Bva12g02197 515 PANTHER - 2 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02197 Bva-Chr12 16945021 16948265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02197 - - gmx:100783378 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02197 12 16945021 16948265 Bva12g02197 12 16945021 16948265 ECH