Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02196 ATGGATTCTGGCAATAGTGGAAGTATCTCTTCTAGTGGTGATGAGGAATACGATTCGCGGGTTGAGACAGTTCCAGGCTTCTTGACCCAATTTGGTTCCATTTCACAATCACACCCAAACTCTTCGCTTCTTTCTCATCACCAAAACCACCAACCcactttgtttgatttttcacAAAGTTACCTCCATGCTCTCTCTCAATCCCAACCAAACTCAAACCCCAATTCTCTGCTCAATTTGGATACGACTACTTCTCAGGGTCGAAGATCCGAGCCTGGTTGCACCGACCCTGCAGCAAACCTACCTGGAGCATCATCATCGGCGACTAACCAGTCTTTGTTGGATCCTCATTCTCAAGCACTTGGCCAGTGTTCTACAGACCCTTCACTGCAATTACGCTCAGTCCACGATGATAATGCACGAGGAGTTTCACTTTCTGCTCCCACCAATGTAGTACGGAACTCAAAGAAGAGAACCAGAGCTTCAAGAAGGGCGCCCACTACAGTTCTGACCACCGACACCTCAAATTTCAGAGCCATGGTTCAAGAATTCACCGGCATCCCTGCACCGCCGTTTTCAGGCTCATCCTACTCCCGCCGTCTCGATCTTCTCACGGGCTCTTCTTCCTTGCGGTCCAGTTCTAGTCACTTGGAGACAGCAGTTGGCTTTTACCCTTTACGGCCTTCACCTCAAAAGGTTCAACCAAACCCATTGCTTTTATCTTCTCCTTCATCAATgtcatcttcttctccttcaacaTTGTTGCACGCGAATATGGTTGATGCTATAGCTTCCACTACCACTACCAATAATTCCTCAACTTCTATAAACTATCAACTGCCTCCTGATCTTGGTCTACCCTATAACCAGCCCCAGAGCATGCTGAGCATGCAAAATCACCCTATTCTCGGATTCCAGTCTCCTCTTAATCTTTTGAGCAATAACTCTCTCGCCGGTTTCGGTGCAAAGTCTCAAGGAACTTCATCTATACCTTCGCTTGAGGATCTGGGTATGAGCCATGGCCAAGTGAATGTTCACCTATTAAGTGGTGTACCACCAGCTGCAGCCACTCATGCCCATGTCACTCCTCTGAGAAGCGATGGTGGTAACAGTCACAGAGATGGAGGAGCCAGTGAAGGTAGACGAGATCATCTGCCGAGGCCATTTGATGGGAGTTTTGGAAAGCAGCAACTAGGCGGTAGCTGCAAATTGAACttttcagcttcttcttcatcgAGCAGCTTTAACCACGAGAAGACCTTGGAAAATACCACTGCCAGAGGGGAAGGTACCGTTGATTCCTGGATTTGTTCTTCTGATTA 1322 0.4576 MDSGNSGSISSSGDEEYDSRVETVPGFLTQFGSISQSHPNSSLLSHHQNHQPTLFDFSQSYLHALSQSQPNSNPNSLLNLDTTTSQGRRSEPGCTDPAANLPGASSSATNQSLLDPHSQALGQCSTDPSLQLRSVHDDNARGVSLSAPTNVVRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSSYSRRLDLLTGSSSLRSSSSHLETAVGFYPLRPSPQKVQPNPLLLSSPSSMSSSSPSTLLHANMVDAIASTTTTNNSSTSINYQLPPDLGLPYNQPQSMLSMQNHPILGFQSPLNLLSNNSLAGFGAKSQGTSSIPSLEDLGMSHGQVNVHLLSGVPPAAATHAHVTPLRSDGGNSHRDGGASEGRRDHLPRPFDGSFGKQQLGGSCKLNFSASSSSSSFNHEKTLENTTARGEGTVDSWICSSD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02196 440 MobiDBLite consensus disorder prediction 398 440 - -
Bva12g02196 440 MobiDBLite consensus disorder prediction 372 389 - -
Bva12g02196 440 MobiDBLite consensus disorder prediction 361 440 - -
Bva12g02196 440 Pfam VQ motif 164 191 IPR008889 -
Bva12g02196 440 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 439 IPR039609 -
Bva12g02196 440 MobiDBLite consensus disorder prediction 138 168 - -
Bva12g02196 440 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 439 - -
Bva12g02196 440 MobiDBLite consensus disorder prediction 66 91 - -
Bva12g02196 440 MobiDBLite consensus disorder prediction 66 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02196 Bva-Chr12 16933992 16935982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02196 - - tcc:18592176 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02196 12 16933992 16935982 Bva06g02736 06 17202522 17204695 BWGD
Bva12g02196 12 16933992 16935982 Bva12g02196 12 16933992 16935982 ECH