Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02192 ATGGCGGAGCGGGAACCACCACCCTTATCCTCATCGCAAACACCGCTGCGGCCGCCCCTACCACCTCATATTTCTGGtaatcaaaaccaaattaCCATACACCCCGTAAAACAAGCGCAATTGGAATTACCCGACTTGAACAAGAGCACCTACGTTGTCCAGTTTCCTCGAGATCAAGTCTATCGAGTTCCAACTCCAGAAAATGCTCGCGTCACCGAACTCCATCGAAACCCTCCTAAGGACGATAAAAAGCGGAGACGCTGTATTTGTTTTGTGGTTTTCTCTGTGTTGGTGGCCATTGCCGTCCTCCTCGTTGCTGTCGTAATAGGTGGTCTTTTTCCTCTGTTGCATAACAATAAAGACCCTAGGTTTTCCATCCAACGTTTTCTCCTCAATAGCAAAAACAAGGCAGAGGAGTACGGAATTTCCTTGCGAGTCGATAATCCAAACCCAAAAGTAGGCATCTTGTATAAAGAAGGAGGGAGCGTTTCCCTTTCTTTAAGGCAACAAGAAATTGCTTCAGGAAGCTACCCAAGTTTCTATCAAGGCCATGGTGATTCCAAAGTGTTTGGCATCACTTTGAAGGGCTCGAAAAGCAGCTTGCATGATGAGAAAAGTATGAAAAACGATAAAAGCAAAGTCGACGTCGCATTGTCATTATCCATTCATGTCCAAACACAAATGAAAATGGGGTTCTTGCATAATGCGACAATGAAGTACGAAGTTACGTGCCAAGTCACCGTGGATACATTGGCCAAAGGCACTACTCGCATACTTTCTCAAAAATGCCAAGCTAAAAGATCCTA 806 0.4454 MAEREPPPLSSSQTPLRPPLPPHISGNQNQITIHPVKQAQLELPDLNKSTYVVQFPRDQVYRVPTPENARVTELHRNPPKDDKKRRRCICFVVFSVLVAIAVLLVAVVIGGLFPLLHNNKDPRFSIQRFLLNSKNKAEEYGISLRVDNPNPKVGILYKEGGSVSLSLRQQEIASGSYPSFYQGHGDSKVFGITLKGSKSSLHDEKSMKNDKSKVDVALSLSIHVQTQMKMGFLHNATMKYEVTCQVTVDTLAKGTTRILSQKCQAKRS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02192 268 Pfam Late embryogenesis abundant protein 144 237 IPR004864 -
Bva12g02192 268 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 34 266 - -
Bva12g02192 268 MobiDBLite consensus disorder prediction 1 28 - -
Bva12g02192 268 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 34 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02192 Bva-Chr12 16896274 16897438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02192 50 268 EF-hand Containing Proteins AT5G21130 28.194 7.22e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02192 - - aprc:113853148 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02192 12 16896274 16897438 Bva12g02192 12 16896274 16897438 ECH