Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02191 ATGGACAGCATAATGAGCAAGCTCCGTAATCTGGATGCATACCCTAAAATCAACGAGGATTTCTACAGTCGCACCCTCTCCGGTGGCGTTATCACTCTTGCCTCTTCCGTCGTCATGCTCTTGCTCTTCTTTTCCGAGCTCCGATTGTATCTCCATGCTGTAACTGAAACGAAGCTGGTTGTAGATACTTCTAGAGGAGAAACACTACGTATCAATTTTGATGTTACCTTTCCTGCCCTGCCATGTTCGATACTCAGTCTTGATGCCATGGACATCAGTGGAGAGCAACATCTTGATGTTAAACATGATATAATCAAGAAAAGATTGGACACTCATGGCAACGTAATAGAAGCAAGGCAGGATGGAATTGGTGCTCCCAAGATTGAAAAGCCTTTGCAGAGGCATGGAGGCAGGCTTGAGCATAATGAGACATATTGTGGATCTTGTTATGGTGCAGAAGCGTCAGATGATGATTGCTGTAATTCCTGTGAGGAAGTTCGTGAAGCATATCGAAAAAAAGGTTGGGCACTTTCAGATCCAGATTTAATTGACCAGTGCAAAAGAGAAGGCTTCTTGCAGAGTATAAAGGATGAAGATGGTGAAGGATGTAATATCTATGGTTTCCTGGAAGTGAATAAGGTGGCTGGGAATTTCCATTTTGCTCCAGGGAAAAGTTTTCAGCAGTCTGGTGTCCATGTACATGACCTTCAGGTCTTTCAAAAGGAATCGTTCAATGTAAGTCACCGGATTAACAGACTGGCTTTTGGAGAGTATTTCCCTGGTGTTGTGAATCCTCTTGACGGtGTGCAATGGACACAAGTAGCACCAAGTGGGACGTATCAGTATTTCATCAAGGTTGTGCCTACTGTGTACACTGAGGTGAGCGGACACACTATTCAGTCAAATCAGTTCTCAGTGACGGAACACTTCAAGAGTGGAGAAGTGGGTCGTCTTCAGTCCTTGCCTGGagtcttcttcttctatgaCCTTTCTCCAATTAAGGTTACTTTCACGGAAGAACATAATTCATTCTTGCACTTTCTTACTAACGTGTGTGCCATTGTTGGAGGTGTTTTCGCTGTTTCCGGAATACTGGATTCTTTTATCTACCACGGTCAAAGGGCAATcaagaagaagatggaaatTGGTAAATTCAGCTG 1160 0.4259 MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSVVMLLLFFSELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDTHGNVIEARQDGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDDDCCNSCEEVREAYRKKGWALSDPDLIDQCKREGFLQSIKDEDGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLQVFQKESFNVSHRINRLAFGEYFPGVVNPLDGVQWTQVAPSGTYQYFIKVVPTVYTEVSGHTIQSNQFSVTEHFKSGEVGRLQSLPGVFFFYDLSPIKVTFTEEHNSFLHFLTNVCAIVGGVFAVSGILDSFIYHGQRAIKKKMEIGKFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02191 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Bva12g02191 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Bva12g02191 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 385 IPR045888 -
Bva12g02191 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02191 Bva-Chr12 16890018 16895362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02191 K20367 - cpap:110816671 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02191 12 16890018 16895362 Bva12g02191 12 16890018 16895362 ECH