Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02188 ATGACTCAGACAGACAGAATGGTACTCTCTCCTACTCCCGTTGTCTTCGTCTTCCTTCTACTGAGTCTGACTACTCTGCTTTTTCAGTCTGAGTTAGCTCAGGCTCAGGCTCAGCCTCCTTTTGCTTGTGATTGGTCGAACCCATCTACCAGATCTTACCCATTTTGTAATCCCAAGCTTTCCATCAAGCAACGAGTGAATGACCTTGTCTCCCGCCTCACCTTGGACGAGAAGCTCTCCCAACTGGTGAACTCGGCCCCTGCCATTCCCCGACTTGGTATCCCCAATTACGAATGGTGGAGTGAAGCATTACACGGAGTAGCCAACGTTGGTCGTGGAATCCATCTCAATGCCGCTATCTCATCTGCTACTAGTTTCCCCCAAGTCATTCTCACCGCCGCCACCTTCGACTCTCACCTCTGGTATAGAATCGCTAGGGCCATCGGACTTGAAGCCAGAGCTATCTATAATGCTGGCCAAGCAACCGGGATGACTTTTTGGGCTCCAAACATTAACATCTTCAGGGACCCAAGATGGGGCAGAGGCCAAGAAACCGCTGGGGAAGACCCAACGGTTGCTTCCAACTATGCAATTGCCTACGTTAGAGGGCTTCAAGGGGATTCCTTCCTGGGAGGCAAAATCAGAGGCCATCTTCAAGCTTCGGCTTGTTGCAAGCATTTTACGGCCTATGATTTGGATAATTGGAAGGGTGTCAATCGCTTTCTCTTCGATGCTAAAGTGACCGTGCAAGATCTAGCAGACACATACCAGCCTCCATTTCAGAGTTGCATACAGCAAGGACGAGCCAGTGGGATAATGTGTGCTTACAATCGCGTGAATGGGGTTCCAAACTGTGCAGATCATAATCTATTAACCAAAATGGCCAGAAGGGAATGGGATTTTCATGGGTACATCACGTCGGATTGTGGCGCAGTCTCAATTATTCATGATGGTCAGGAATACGCAAAATCCCCCGAAGATGCTGTAGCCGATGTCCTAAGAGCTGGAATGGATGTAGAGTGTGGATCATACTTGCAGGAACATGCAAAATCAGCAGTATTACAGAAAAAAGTAGATGTATCTGAAATACACCGTGCCCTTCACAATCTGTTTTCCATCAGAATTAGGCTAGGCTTGTTCGATGGAAATCCAGCGAGACTGTCATTCGGCATGGTTGGTCCCAATCAAGTTTGCTCCAAAGAGCACCTGTATCTTGCTCTCGAAGCTGCAAGAAATGGCATAGTCCTCTTAAAGAACTCAGCAAAACTTCTCCCGCTTCCAAAAACAAGCCCCGCTATTTCCCTTGCCGTGATAGGCCCAAACGCCAATGCTTCCCCGCTGACTCTTTTGGGAAACTATGCAGGCCCTCCCTGTAAATCTTTGACCATATTGGAAGGCTTTCAGCACTATGTTAAGGACACCATTTTTCATCCTGGTTGTGACGGGGGAGTGAAGTGTGATTCGGCTCAAATAGACCGAGCTGTGCAAATTGCTCAAAGGGTGGATTATGTGGTGCTGGTTATGGGTTTGGATCAAAGTGTAGAGAGGGAGTCACATGATCGTGTTCACCTTGACTTACCGGGCAAGCAACAGGAACTCATTGACAGCGTAGCAAAAGCTTCTAGGAGACCAGTTATTCTGGTGCTCCTTTGTGGAGGCCCTGTCGATATTACTTCAGCTAAGTATGACAACAAAATCGGAGGTATCTTATGGGCTGGTTATCCTGGTGAAGTTGGAGCTATTGCACTCGCGCAAATCATCTTTGGCGACCACAACCCAGGAGGACGACTACCAATGACTTGGTACCCAAAAGATTACATTAGAGTACCAATGACAGACATGAGGATGAGAGCTGATCCATCATCAAACTACCCTGGAAGAACTTATCGATTTTACACAGGTCCCAAGGTGTTTGAATTCGGCTTTGGCCTAAGCTACTCCAAATATTCGTACGAGTTTGTCTTTGTTGCTAGCAACAAACTTTACCTCAATCAATCAACAACTCATTCGGTGCTTGAGAATTCGGAAACCATCAGTTACAAATTGGTGTCAGAATTGGGTACAGAAACTTGTGAAACAATGTCCGTCCCCGTCACCGTAGGTGTTAAAAATGACGGTGCAATGGTGGGAAGGCATCCGGTGTTGCTTTTTACGAGGCATGCGAAACAGAGAAATGGAAATCCAATCAAACAATTGGTTGGGTTTCAGAGTTTGATGTTAGATGCAGGAGAAAGAGCTCAAGTGGGATTTATGGTAAGCCCATGTGAGCACCTTAGCAGAGCAAACGAGGCTGGTTCAAAGGTGATTGAACAAGGGTCTCATTTCTTGCTCGTGGGTGATCAAGAGTACCCAATAGAAGTCATTTTCTG 2369 0.4694 MTQTDRMVLSPTPVVFVFLLLSLTTLLFQSELAQAQAQPPFACDWSNPSTRSYPFCNPKLSIKQRVNDLVSRLTLDEKLSQLVNSAPAIPRLGIPNYEWWSEALHGVANVGRGIHLNAAISSATSFPQVILTAATFDSHLWYRIARAIGLEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPTVASNYAIAYVRGLQGDSFLGGKIRGHLQASACCKHFTAYDLDNWKGVNRFLFDAKVTVQDLADTYQPPFQSCIQQGRASGIMCAYNRVNGVPNCADHNLLTKMARREWDFHGYITSDCGAVSIIHDGQEYAKSPEDAVADVLRAGMDVECGSYLQEHAKSAVLQKKVDVSEIHRALHNLFSIRIRLGLFDGNPARLSFGMVGPNQVCSKEHLYLALEAARNGIVLLKNSAKLLPLPKTSPAISLAVIGPNANASPLTLLGNYAGPPCKSLTILEGFQHYVKDTIFHPGCDGGVKCDSAQIDRAVQIAQRVDYVVLVMGLDQSVERESHDRVHLDLPGKQQELIDSVAKASRRPVILVLLCGGPVDITSAKYDNKIGGILWAGYPGEVGAIALAQIIFGDHNPGGRLPMTWYPKDYIRVPMTDMRMRADPSSNYPGRTYRFYTGPKVFEFGFGLSYSKYSYEFVFVASNKLYLNQSTTHSVLENSETISYKLVSELGTETCETMSVPVTVGVKNDGAMVGRHPVLLFTRHAKQRNGNPIKQLVGFQSLMLDAGERAQVGFMVSPCEHLSRANEAGSKVIEQGSHFLLVGDQEYPIEVIF 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02188 789 Gene3D - 65 387 IPR036962 GO:0004553|GO:0005975
Bva12g02188 789 SMART Fn3_like_2 712 782 IPR026891 -
Bva12g02188 789 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 414 649 IPR036881 GO:0004553|GO:0005975
Bva12g02188 789 Gene3D Immunoglobulins 675 787 IPR013783 -
Bva12g02188 789 Gene3D - 399 647 IPR036881 GO:0004553|GO:0005975
Bva12g02188 789 Pfam Glycosyl hydrolase family 3 N terminal domain 119 365 IPR001764 GO:0004553|GO:0005975
Bva12g02188 789 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 14 788 - -
Bva12g02188 789 PANTHER SUGAR HYDROLASE-RELATED 14 788 IPR044993 GO:0009044|GO:0045493
Bva12g02188 789 Pfam Glycosyl hydrolase family 3 C-terminal domain 414 646 IPR002772 GO:0004553|GO:0005975
Bva12g02188 789 Pfam Fibronectin type III-like domain 714 781 IPR026891 -
Bva12g02188 789 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Bva12g02188 789 PRINTS Glycosyl hydrolase family 3 signature 126 145 IPR001764 GO:0004553|GO:0005975
Bva12g02188 789 PRINTS Glycosyl hydrolase family 3 signature 220 236 IPR001764 GO:0004553|GO:0005975
Bva12g02188 789 SUPERFAMILY (Trans)glycosidases 53 412 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02188 Bva-Chr12 16868066 16871958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02188 37 787 Glycoside Hydrolase AT1G78060 64.589 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02188 - - aprc:113867121 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02188 12 16868066 16871958 Bva12g02188 12 16868066 16871958 ECH