Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02185 ATGAGTGCGGATTTAAAGACAACTGCCCCTAACGGTCGTGAGAACGTTTTAACATCACAGGAGGAACAGGCAAAGGTGAATGAGGTTAGAAGGTTGATAGGGCCGTTGCCAGATAAGTCATCCATTTATTGTTCTGATGCATCCATCACACGGTATTTAATAGCACGGAATTGGAATGTCAAGAAAGCTACTAAAATGTTGAAAGAGACCGTAAAATGGAGAGCAGAATATAAACCTGAAGAGATCCGTTGGGAAGATATTGCTCACGAAGCAGAGACAGGGAAGATCTATAGATCAAATTATATTGACAAGCATGGCAGAACAGTCCTTGTAATGAGACCTTCGCGTCagAACTCAAAGTCCATAAAAGGACAGATTAAGTATTTGGTATACTGTATGGAGAACGCTATTTTAAATCTTCCGCCAGATCAGGGAAAGATGGTCTGGTTAATTGACTTCCAGGGTTTCAATTTGTCGCATATATCGGTAAAGGTGACGCGAGAAACTGCCCATGTATTACAAAACCATTATCCAGAACGGCTGGGTTTGGCAATACTGTACAATCCACCAAAGTTCTTTGAACCATTCTTCACGATGGTGAAGCCCCTGTTAGAGCCCAAGACCTATAATAAAGTCAAGTTCGTTTATTCTGATGATCTCAACAGCAAGAAGATCATGGAGGATCTGTTTGATTCTGACCAACTTGAGTCTGGATTTGGTGGGAATGACGACACAGGATTTGACATAAGTAAATATGCTGAGAGAATGAAAGAGGATGATAAGAAGATACCCTCGTTTTGGACTAGGTTGAACTCTTCATCGGCAGCCCCACATGATGCTCCTCCTTTAGATTCAATCAAGATAAACTCTGATTCTGATGCTTCCGACAATGAGGAAAAAGATCTCTCTCCTGCTCATGGGATGGATGCGGAGATTATAAATACTGATCAGATGGTCAATCAAGGGGACCGAAATGACACAGCAGATAGACATTA 995 0.4151 MSADLKTTAPNGRENVLTSQEEQAKVNEVRRLIGPLPDKSSIYCSDASITRYLIARNWNVKKATKMLKETVKWRAEYKPEEIRWEDIAHEAETGKIYRSNYIDKHGRTVLVMRPSRQNSKSIKGQIKYLVYCMENAILNLPPDQGKMVWLIDFQGFNLSHISVKVTRETAHVLQNHYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKVKFVYSDDLNSKKIMEDLFDSDQLESGFGGNDDTGFDISKYAERMKEDDKKIPSFWTRLNSSSAAPHDAPPLDSIKINSDSDASDNEEKDLSPAHGMDAEIINTDQMVNQGDRNDTADRH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02185 331 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Bva12g02185 331 MobiDBLite consensus disorder prediction 291 306 - -
Bva12g02185 331 Pfam CRAL/TRIO, N-terminal domain 45 69 IPR011074 -
Bva12g02185 331 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Bva12g02185 331 PANTHER GH16843P 1 303 - -
Bva12g02185 331 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Bva12g02185 331 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Bva12g02185 331 CDD SEC14 92 242 IPR001251 -
Bva12g02185 331 SMART sec14_4 90 244 IPR001251 -
Bva12g02185 331 MobiDBLite consensus disorder prediction 271 331 - -
Bva12g02185 331 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Bva12g02185 331 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 303 - -
Bva12g02185 331 Gene3D - 3 274 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02185 Bva-Chr12 16849451 16853321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02185 - - gmx:100780151 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02185 12 16849451 16853321 Bva06g02746 06 17275480 17281370 BWGD
Bva12g02185 12 16849451 16853321 Bva12g02185 12 16849451 16853321 ECH