Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02183 ATGGCTGCCAGAGTGGCGTTGCTCTTAGCTCTGTGTGTGTTGCCGGCGATGGTTGCCGCCATTCGCCCAGAGAAGAACCCGTTCTGCGTCCAGGGTCGTGTCTACTGTGACACTTGCCGTGCTGGTTTTGAGACTCCCGCCACCACCTACATTGCCGGCGCTGAGGTTATTCTGGAATGCAAGGACAAGACTGGAATGGAAGTTGTGTACAGAAAGAAGGGGAAGACTGATTCAAAAGGATCATATAAAATCTGGGTTGAGGAGGATCATGTAGACCAGATTTGTGATGCCAAGCTTCTTAGCAGCCCTCGGGAGGATTGCAGAGTAGCTTCTCCAGGCCGTGACCAGGCCCGCGTAATTCTTACACGCAACAATGGGATTGCCTCTGATGATCGATTTGCCAACAACATGGGCTTCATGAAGGATGAGACTGTATCTGGCTGTGATGAGATTCTGAGGTCATACCAAGAGTTCGATGATTG 482 0.5104 MAARVALLLALCVLPAMVAAIRPEKNPFCVQGRVYCDTCRAGFETPATTYIAGAEVILECKDKTGMEVVYRKKGKTDSKGSYKIWVEEDHVDQICDAKLLSSPREDCRVASPGRDQARVILTRNNGIASDDRFANNMGFMKDETVSGCDEILRSYQEFDD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02183 160 Pfam Pollen protein Ole e 1 like 30 112 - -
Bva12g02183 160 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 3 159 IPR006041 -
Bva12g02183 160 ProSitePatterns Pollen proteins Ole e I family signature. 31 40 IPR006040 GO:0005615
Bva12g02183 160 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02183 Bva-Chr12 16840899 16843069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02183 - - gmx:100305566 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02183 12 16840899 16843069 Bva06g02748 06 17288031 17289714 BWGD
Bva12g02183 12 16840899 16843069 Bva12g02183 12 16840899 16843069 ECH