Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02182 ATGTTGTTAGGGAAGAGACCTCGTCCTCGTCCTCCGATGAAGAGAACGACGAGCTTCTCGGAGATAAGCTTCGATCTGAACGGGGGCGGTGATGCTCCAGTTGCAGTGGCAGCGGTCGATCCGAATAACCGAGGCGAAGGTGGTGGTGTTGCCGGTATAAGTAGTCCGTGGAAACAGACGGATGGAGATTGgttgaataataataacactAATGGATTCCATCAGAATGAGGGCGCCGTTTCACTCTTACCCAGAAACAATAGAAGGCATTCCGCCAATTATCTAGAGACTGCCGACTTCTTGAGGTCTTGCGGTTTCTGCAAACGTCGCTTGGTAGCCAGCCGGGACATCTACATGTACAGGGGTGATACTGCTTTCTGTAGTCTAGAATGCCGTCAGCAGCAGATGAATCAGGATGAGAGGAAGGACAAGCGTTGTGTGGGAGTGGGTGTGGCATCGAAGAAACAAGTTTTGGCTACTGCTGGAGCATCTGGTTCCCAAGTCACCACCACCAAAGGCGAAACTGTGGCTGCCTTGTA 539 0.5028 MLLGKRPRPRPPMKRTTSFSEISFDLNGGGDAPVAVAAVDPNNRGEGGGVAGISSPWKQTDGDWLNNNNTNGFHQNEGAVSLLPRNNRRHSANYLETADFLRSCGFCKRRLVASRDIYMYRGDTAFCSLECRQQQMNQDERKDKRCVGVGVASKKQVLATAGASGSQVTTTKGETVAAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02182 179 Pfam zinc-finger of the FCS-type, C2-C2 93 142 IPR007650 -
Bva12g02182 179 PANTHER FCS-LIKE ZINC FINGER 5 1 178 - -
Bva12g02182 179 PANTHER FCS-LIKE ZINC FINGER 5 1 178 - -
Bva12g02182 179 SUPERFAMILY Galactose mutarotase-like 63 127 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bva12g02182 179 ProSiteProfiles Zinc finger FLZ-type profile. 99 143 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02182 Bva-Chr12 16834822 16836161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02182 - - var:108331042 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02182 12 16834822 16836161 Bva06g02750 06 17297909 17299269 BWGD
Bva12g02182 12 16834822 16836161 Bva12g02182 12 16834822 16836161 ECH