Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02181 ATGTTGAAATATTGTGGTGCATTTTGCATTGTGGCGACGTTGTTGGCAGTGACTAATTATGCACATGAGTTGGCACCAGCACCGTCGCCATCACAAGACTGCTCCACAATGATATATAGCAACATGGTAGATTGTTTACCATATCTGATGAATGAAGAATCAAAACCAGATGGTTCGTGCTGTTCTGGCTTTGAATTTGTTCTCGAGACCGATGTCCACTGCATTTGTGAGGCTATGGACAGTCCCGTGGCTTCGGTTTTGGGTTTGAATATCACGAGGGCAATCTCATTGCCTATTACTTGTGCCATCTCTTCCTCGCCTCTTACTAACTGCGCTCCGTCCTTTGATGTTTCTCCTCCTATGTTGCCCCCTGGTCCATCTCCAAATAATCAGTTGCCAAGCATCGCAACGGCACCGTCTTTGTCTGTGGGACGAAATGGAGCTCATTCTATCTCCGCTTCCTTCGCGCTTCTTCTTGGTCTTGAGCTTCCAGCTCCTTTGCCTCAACTACAAGTGTGCACTGCATCGGAAGcgcaaagaagaagaataatggCTGGCATCGGGCATGGGAATGGATACATAAATGGCGTATTACCAAATAGGCATCCTGCTACAATATCTGAAGTAGACGAGTTCTGCCACGCACTTGGGGGAAAGAAGCCAATTCACAGCATATTAATAGCAAACAATGGAATGGCCGCTGTCAAATTTATTCGTAGTGTCAGGAGCTGGGCCTATGAGACATTTGGCACAGAGAAGGCTATCATGTTGGTAGCCATGGCTACTCCAGAGGACATGAGAATCAATGCAGAACATATCAGAATAGCTGATCAATTTGTAGAAGTACCTGGTGGGACCAATAACAATAACTATGCCAATGTGCAGCTTATTGTAGAGATGGCCGAGATAACTCATGTTGATGCAGTGTGGCCTGGTTGGGGTCACGCCTCTGAGAATCCTGAACTGCCAGATGCATTAAATGCAAAAGGAATTGTATTTCTTGGCCCTCCTTCCATATCTATGGCAGCGTTGGGAGATAAAATTGGTTCGTCATTAATTGCTCAAGCAGCAGAAGTACCAACTCTACCATGGAGTGGTTCTCATGTGAAAATTCCTGCTGATAGTTGCTTGGTAACGATACCTGATGAAATTTACCGGGAAGCTTGTGTCTATACAACTGAGGAAGCAATTGCAAGTTGTCACGTTGTTGGTTACCCTGCAATGATCAAGGCATCTTGGGGAGGTGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTTAGGGCACTGTTCAAGCAAGTTCAAGGTGAAGTTCCAGGCTCACCTATATTTATAATGAAGGTTGCATCTCAGAGCCGGCATTTAGAAGTTCAGTTACTTTGCGATCAGTACGGAAATGTTGCAGCTTTGCATAGCCGTGATTGCAGTGTTCAAAGGAGGCACCAAAAGATTATTGAGGAGGGACCAATTACTGTAGCTCCACTGGAGACAGTGAAAAAACTGGAACAGGCGGCTAGAAGATTAGCTAAATGTGTAAATTATGTTGGAGCAGCTACTGTTGAGTATCTATATTGTATGGACACTGGCAAGTACTACTTTCTAGAGCTGAACCCCCGACTACAGGTTGAGCATCCTGTTACTGAGTGGATAGCAGAGATAAATCTCCCAGCTGCACAAGTTGCTGTTGGGATGGGTATCCCACTCTGGCAAATTCCTGAGATAAGGCGTTTCTATGGGGTAGAACATGGTGGAGGATATGATGCTTGGAGGAAAACATCCACTTCAGCTACcccttttgattttgatagaGCAGTATCTACAAGGCCGAAAGGTCATTGTGTGGCTGTGCGAGTGACAAGTGAGGATCCTGATGATGGTTTTAAGCCAACAAGTGGGAAAGTACAGGAATTGAGCTTTAAAAGCAAGCCGAATGTGTGGGCATACTTCTCTGTTAAGTCTGGAGGAGGAATTCATGAATTTTCAGATTCTCAGTTTGGACATGTTTTCGCATTTGGAGAGTCTAGAGCCTTAGCTATTGCAAATATGGTACTAGGGCTGAAGGAGGTTCAAATACGGGGAGAAATTCGTACCAATGTTGATTATACCATTGATCTTTTAAACGCTTCGGACtacagagaaaacaaaattcacaCTGGATGGTTGGACAGTAGGATTGCAATGCGGGTTAGGGCGGAAAGGCCACCTTGGTATCTTTCTGTTGTTGGAGGGGCACTATTTAAAGCCTCTACTAGTAGTGCAGCAATAGTTTCAGATTATGTTGGCTATCTTGAAAAGGGACAAATCCCTCCCAAGCATATATCTCTTGTCCACTCTCAAGTGTCCTTGAACATTGAAGGAAGTAAATACACGATTGACATGGTAAGAGGAGGACCAGGAAGTTATAGATTGAGAATGAATGGTTCAGAAATAGAAGCAGAGATACATACATTACGTGATGGGGTTGGATGGAAACAGTCATGTGATATATGCAGAGGAAGAAGCAGCAGGAACTCGCCTTCTAATAGATGGAAGGACTTGTTTGCTTCAGAATG 2558 0.4351 MLKYCGAFCIVATLLAVTNYAHELAPAPSPSQDCSTMIYSNMVDCLPYLMNEESKPDGSCCSGFEFVLETDVHCICEAMDSPVASVLGLNITRAISLPITCAISSSPLTNCAPSFDVSPPMLPPGPSPNNQLPSIATAPSLSVGRNGAHSISASFALLLGLELPAPLPQLQVCTASEAQRRRIMAGIGHGNGYINGVLPNRHPATISEVDEFCHALGGKKPIHSILIANNGMAAVKFIRSVRSWAYETFGTEKAIMLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEMAEITHVDAVWPGWGHASENPELPDALNAKGIVFLGPPSISMAALGDKIGSSLIAQAAEVPTLPWSGSHVKIPADSCLVTIPDEIYREACVYTTEEAIASCHVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPLETVKKLEQAARRLAKCVNYVGAATVEYLYCMDTGKYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIRRFYGVEHGGGYDAWRKTSTSATPFDFDRAVSTRPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEVQIRGEIRTNVDYTIDLLNASDYRENKIHTGWLDSRIAMRVRAERPPWYLSVVGGALFKASTSSAAIVSDYVGYLEKGQIPPKHISLVHSQVSLNIEGSKYTIDMVRGGPGSYRLRMNGSEIEAEIHTLRDGVGWKQSCDICRGRSSRNSPSNRWKDLFASE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02181 852 ProSiteProfiles ATP-grasp fold profile. 374 566 IPR011761 GO:0005524|GO:0046872
Bva12g02181 852 Pfam Biotin carboxylase, N-terminal domain 222 341 IPR005481 -
Bva12g02181 852 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 389 571 IPR005479 GO:0005524
Bva12g02181 852 Pfam Probable lipid transfer 19 111 IPR016140 -
Bva12g02181 852 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 111 IPR036312 -
Bva12g02181 852 PANTHER BNAC06G01580D PROTEIN 189 826 - -
Bva12g02181 852 Gene3D - 452 710 - -
Bva12g02181 852 Gene3D - 347 387 - -
Bva12g02181 852 ProSiteProfiles Biotin carboxylation domain profile. 221 728 IPR011764 -
Bva12g02181 852 Gene3D - 23 108 IPR036312 -
Bva12g02181 852 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 345 583 - -
Bva12g02181 852 Pfam Biotin carboxylase C-terminal domain 618 724 IPR005482 -
Bva12g02181 852 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 535 542 IPR005479 GO:0005524
Bva12g02181 852 Gene3D - 389 451 IPR013815 GO:0005524
Bva12g02181 852 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 189 826 - -
Bva12g02181 852 SUPERFAMILY PreATP-grasp domain 200 343 IPR016185 -
Bva12g02181 852 SMART Biotin_carb_C_2 617 724 IPR005482 -
Bva12g02181 852 Gene3D - 195 346 - -
Bva12g02181 852 SUPERFAMILY Rudiment single hybrid motif 612 725 IPR011054 -
Bva12g02181 852 CDD AAI_LTSS 42 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02181 Bva-Chr12 16823382 16831733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02181 188 822 Acyl Lipid Metabolism Gene Families AT1G36160 90.236 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02181 K11262 - zju:107420964 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02181 12 16823382 16831733 Bva12g02181 12 16823382 16831733 ECH