Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02160 ATGAGCAATCTGAGAACACTCTGTAGGCCTCATACGGTATTCTCCTTTATTAGTTGCAGACACCAATTCCAATTTAGGGCTTCATTTCGAAACCCTAATTGCAAGTCTCGTTTGCCACCGCTATCACTTTATTCTACATGGTTCGATTCCTCGTGTTCTAGTAGGACAGAGCACTGGTTTCGTGTGAATCAGAGGAGAACTGTGGTCAGGGCATCGAACTGGACGGAGGAAAAATCCCCGTATGAAACACTCgAATTAGAAAGAGATGCTGACGAGGAGCAGATAAAGAATGCCTATAGACGCTTGGCCAAATTCTATCATCCAGATGtctACGATGGTAGAGGTACCCTTGAGGAAGGTGAGACAGCAGAAGCTAGGTTCATCAAGATTCAAGCAgcttatgaattattaatagaTCAGGAGAGGCGGAGAAAGTACGATATTGATAACCGAGTCAACCCAACGAAGGCGTCTCAGGCGTGGATGGAGTGGCTTATGAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCCGAGCAACAGCAGCGTGAGTTAAATATTCGTGCTCGTCGTCTTGCTCGCTCAAAGATTGAtccagaagaagaaaggaagatcCTGGCGAGAGAGAAAAAAGCTTCTGCAGAATACTTCTCCAATACCATTAAGAGGCATACACTAGTATTAAAGAAACGAGATTTGATGAGAAGAAAGGCcgaggaagaaaataagacGACTATCGCTCAACTCTTAGCTGCAGAGGGTCTCGAGCTCGATACAGATAGTGATGATGCGCTCTA 815 0.4221 MSNLRTLCRPHTVFSFISCRHQFQFRASFRNPNCKSRLPPLSLYSTWFDSSCSSRTEHWFRVNQRRTVVRASNWTEEKSPYETLELERDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDQERRRKYDIDNRVNPTKASQAWMEWLMKKRKAFDQRGDMAIAAWAEQQQRELNIRARRLARSKIDPEEERKILAREKKASAEYFSNTIKRHTLVLKKRDLMRRKAEEENKTTIAQLLAAEGLELDTDSDDAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02160 271 Coils Coil 81 101 - -
Bva12g02160 271 CDD DnaJ 80 139 IPR001623 -
Bva12g02160 271 PANTHER LD30543P 53 268 - -
Bva12g02160 271 PRINTS DnaJ domain signature 168 187 IPR001623 -
Bva12g02160 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Bva12g02160 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Bva12g02160 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Bva12g02160 271 SUPERFAMILY Chaperone J-domain 72 148 IPR036869 -
Bva12g02160 271 Pfam DnaJ domain 80 147 IPR001623 -
Bva12g02160 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Bva12g02160 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Bva12g02160 271 SMART dnaj_3 78 142 IPR001623 -
Bva12g02160 271 PANTHER CO-CHAPERONE PROTEIN DJLA 53 268 - -
Bva12g02160 271 Gene3D DnaJ domain 65 163 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02160 Bva-Chr12 16712143 16715488 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02160 - - gmx:100808285 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02160 12 16712143 16715488 Bva12g02160 12 16712143 16715488 ECH